Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=23650
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=23675", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=23625", "results": [ { "id": 23644, "identifier": "26245", "identifier_type": "int", "name": "OR2M4", "properties": { "url": "http://identifiers.org/ncbigene/26245", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "olfactory receptor, family 2, subfamily M, member 4" }, "metanode": "Gene" }, { "id": 23645, "identifier": "55915", "identifier_type": "int", "name": "LANCL2", "properties": { "url": "http://identifiers.org/ncbigene/55915", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "LanC lantibiotic synthetase component C-like 2 (bacterial)" }, "metanode": "Gene" }, { "id": 23646, "identifier": "64422", "identifier_type": "int", "name": "ATG3", "properties": { "url": "http://identifiers.org/ncbigene/64422", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "autophagy related 3" }, "metanode": "Gene" }, { "id": 23647, "identifier": "348487", "identifier_type": "int", "name": "FAM131C", "properties": { "url": "http://identifiers.org/ncbigene/348487", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "family with sequence similarity 131, member C" }, "metanode": "Gene" }, { "id": 23648, "identifier": "6908", "identifier_type": "int", "name": "TBP", "properties": { "url": "http://identifiers.org/ncbigene/6908", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "TATA box binding protein" }, "metanode": "Gene" }, { "id": 23649, "identifier": "PC7_3278", "identifier_type": "str", "name": "Disease", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 23650, "identifier": "597", "identifier_type": "int", "name": "BCL2A1", "properties": { "url": "http://identifiers.org/ncbigene/597", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "BCL2-related protein A1" }, "metanode": "Gene" }, { "id": 23651, "identifier": "9088", "identifier_type": "int", "name": "PKMYT1", "properties": { "url": "http://identifiers.org/ncbigene/9088", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "protein kinase, membrane associated tyrosine/threonine 1" }, "metanode": "Gene" }, { "id": 23652, "identifier": "728642", "identifier_type": "int", "name": "CDK11A", "properties": { "url": "http://identifiers.org/ncbigene/728642", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "cyclin-dependent kinase 11A" }, "metanode": "Gene" }, { "id": 23653, "identifier": "C0221244", "identifier_type": "str", "name": "Dandruff", "properties": { "url": "http://identifiers.org/umls/C0221244", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23654, "identifier": "27071", "identifier_type": "int", "name": "DAPP1", "properties": { "url": "http://identifiers.org/ncbigene/27071", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "dual adaptor of phosphotyrosine and 3-phosphoinositides" }, "metanode": "Gene" }, { "id": 23655, "identifier": "3050", "identifier_type": "int", "name": "HBZ", "properties": { "url": "http://identifiers.org/ncbigene/3050", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "hemoglobin, zeta" }, "metanode": "Gene" }, { "id": 23656, "identifier": "GO:0005884", "identifier_type": "str", "name": "actin filament", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005884", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 23657, "identifier": "80146", "identifier_type": "int", "name": "UXS1", "properties": { "url": "http://identifiers.org/ncbigene/80146", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "UDP-glucuronate decarboxylase 1" }, "metanode": "Gene" }, { "id": 23658, "identifier": "GO:0030097", "identifier_type": "str", "name": "hemopoiesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030097", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23659, "identifier": "C0403592", "identifier_type": "str", "name": "Chronic allograft nephropathy", "properties": { "url": "http://identifiers.org/umls/C0403592", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23660, "identifier": "GO:0002644", "identifier_type": "str", "name": "negative regulation of tolerance induction", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002644", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23661, "identifier": "GO:0032988", "identifier_type": "str", "name": "ribonucleoprotein complex disassembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032988", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23662, "identifier": "GO:0010824", "identifier_type": "str", "name": "regulation of centrosome duplication", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010824", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23663, "identifier": "C1863751", "identifier_type": "str", "name": "Wound healing normal", "properties": { "url": "http://identifiers.org/umls/C1863751", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23664, "identifier": "GO:0042977", "identifier_type": "str", "name": "activation of JAK2 kinase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042977", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23665, "identifier": "GO:0005048", "identifier_type": "str", "name": "signal sequence binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005048", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 23666, "identifier": "23358", "identifier_type": "int", "name": "USP24", "properties": { "url": "http://identifiers.org/ncbigene/23358", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "ubiquitin specific peptidase 24" }, "metanode": "Gene" }, { "id": 23667, "identifier": "C1328428", "identifier_type": "str", "name": "Mycobacterium test", "properties": { "url": "http://identifiers.org/umls/C1328428", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23668, "identifier": "7844", "identifier_type": "int", "name": "RNF103", "properties": { "url": "http://identifiers.org/ncbigene/7844", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "ring finger protein 103" }, "metanode": "Gene" } ] }