Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=23750

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=23775",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=23725",
    "results": [
        {
            "id": 23744,
            "identifier": "GO:0030971",
            "identifier_type": "str",
            "name": "receptor tyrosine kinase binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030971",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 23745,
            "identifier": "8913",
            "identifier_type": "int",
            "name": "CACNA1G",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8913",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "calcium channel, voltage-dependent, T type, alpha 1G subunit"
            },
            "metanode": "Gene"
        },
        {
            "id": 23746,
            "identifier": "C0020615",
            "identifier_type": "str",
            "name": "Hypoglycaemia",
            "properties": {
                "url": "http://identifiers.org/umls/C0020615",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 23747,
            "identifier": "219437",
            "identifier_type": "int",
            "name": "OR5L1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/219437",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 5, subfamily L, member 1 (gene/pseudogene)"
            },
            "metanode": "Gene"
        },
        {
            "id": 23748,
            "identifier": "551",
            "identifier_type": "int",
            "name": "AVP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/551",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "arginine vasopressin"
            },
            "metanode": "Gene"
        },
        {
            "id": 23749,
            "identifier": "81614",
            "identifier_type": "int",
            "name": "NIPA2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81614",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "non imprinted in Prader-Willi/Angelman syndrome 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 23750,
            "identifier": "2619",
            "identifier_type": "int",
            "name": "GAS1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2619",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "growth arrest-specific 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 23785,
            "identifier": "152110",
            "identifier_type": "int",
            "name": "NEK10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/152110",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "NIMA-related kinase 10"
            },
            "metanode": "Gene"
        },
        {
            "id": 23751,
            "identifier": "DB00563",
            "identifier_type": "str",
            "name": "Methotrexate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00563",
                "inchi": "InChI=1S/C20H22N8O5/c1-28(9-11-8-23-17-15(24-11)16(21)26-20(22)27-17)12-4-2-10(3-5-12)18(31)25-13(19(32)33)6-7-14(29)30/h2-5,8,13H,6-7,9H2,1H3,(H,25,31)(H,29,30)(H,32,33)(H4,21,22,23,26,27)/t13-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=FBOZXECLQNJBKD-ZDUSSCGKSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 23752,
            "identifier": "GO:2001181",
            "identifier_type": "str",
            "name": "positive regulation of interleukin-10 secretion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2001181",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23753,
            "identifier": "79971",
            "identifier_type": "int",
            "name": "WLS",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79971",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "wntless Wnt ligand secretion mediator"
            },
            "metanode": "Gene"
        },
        {
            "id": 23754,
            "identifier": "C0520559",
            "identifier_type": "str",
            "name": "Numbness of tongue",
            "properties": {
                "url": "http://identifiers.org/umls/C0520559",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 23755,
            "identifier": "C0149985",
            "identifier_type": "str",
            "name": "Secondary syphilis",
            "properties": {
                "url": "http://identifiers.org/umls/C0149985",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 23756,
            "identifier": "55238",
            "identifier_type": "int",
            "name": "SLC38A7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55238",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "solute carrier family 38, member 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 23757,
            "identifier": "GO:0055064",
            "identifier_type": "str",
            "name": "chloride ion homeostasis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0055064",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23758,
            "identifier": "GO:0031400",
            "identifier_type": "str",
            "name": "negative regulation of protein modification process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0031400",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23759,
            "identifier": "GO:0000302",
            "identifier_type": "str",
            "name": "response to reactive oxygen species",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000302",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23760,
            "identifier": "GO:0072001",
            "identifier_type": "str",
            "name": "renal system development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072001",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23761,
            "identifier": "54715",
            "identifier_type": "int",
            "name": "RBFOX1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54715",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "RNA binding protein, fox-1 homolog (C. elegans) 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 23762,
            "identifier": "C0277925",
            "identifier_type": "str",
            "name": "Peripheral coldness",
            "properties": {
                "url": "http://identifiers.org/umls/C0277925",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 23763,
            "identifier": "DB01082",
            "identifier_type": "str",
            "name": "Streptomycin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01082",
                "inchi": "InChI=1S/C21H39N7O12/c1-5-21(36,4-30)16(40-17-9(26-2)13(34)10(31)6(3-29)38-17)18(37-5)39-15-8(28-20(24)25)11(32)7(27-19(22)23)12(33)14(15)35/h4-18,26,29,31-36H,3H2,1-2H3,(H4,22,23,27)(H4,24,25,28)/t5-,6-,7+,8-,9-,10-,11+,12-,13-,14+,15+,16-,17-,18-,21+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=UCSJYZPVAKXKNQ-HZYVHMACSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 23764,
            "identifier": "C0033375",
            "identifier_type": "str",
            "name": "Prolactinoma",
            "properties": {
                "url": "http://identifiers.org/umls/C0033375",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 23765,
            "identifier": "GO:0004185",
            "identifier_type": "str",
            "name": "serine-type carboxypeptidase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004185",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 23766,
            "identifier": "GO:0060216",
            "identifier_type": "str",
            "name": "definitive hemopoiesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060216",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23767,
            "identifier": "GO:0048525",
            "identifier_type": "str",
            "name": "negative regulation of viral process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048525",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}