Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=23850
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=23875", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=23825", "results": [ { "id": 23844, "identifier": "54807", "identifier_type": "int", "name": "ZNF586", "properties": { "url": "http://identifiers.org/ncbigene/54807", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 586" }, "metanode": "Gene" }, { "id": 23845, "identifier": "101928291", "identifier_type": "int", "name": "LOC101928291", "properties": { "url": "http://identifiers.org/ncbigene/101928291", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "uncharacterized LOC101928291" }, "metanode": "Gene" }, { "id": 23846, "identifier": "22864", "identifier_type": "int", "name": "R3HDM2", "properties": { "url": "http://identifiers.org/ncbigene/22864", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "R3H domain containing 2" }, "metanode": "Gene" }, { "id": 23847, "identifier": "7366", "identifier_type": "int", "name": "UGT2B15", "properties": { "url": "http://identifiers.org/ncbigene/7366", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "UDP glucuronosyltransferase 2 family, polypeptide B15" }, "metanode": "Gene" }, { "id": 23848, "identifier": "92211", "identifier_type": "int", "name": "CDHR1", "properties": { "url": "http://identifiers.org/ncbigene/92211", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "cadherin-related family member 1" }, "metanode": "Gene" }, { "id": 23849, "identifier": "PC7_7652", "identifier_type": "str", "name": "Sphingosine 1-phosphate (S1P) pathway", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 23850, "identifier": "1942", "identifier_type": "int", "name": "EFNA1", "properties": { "url": "http://identifiers.org/ncbigene/1942", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "ephrin-A1" }, "metanode": "Gene" }, { "id": 23851, "identifier": "55745", "identifier_type": "int", "name": "AP5M1", "properties": { "url": "http://identifiers.org/ncbigene/55745", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "adaptor-related protein complex 5, mu 1 subunit" }, "metanode": "Gene" }, { "id": 23852, "identifier": "GO:0060438", "identifier_type": "str", "name": "trachea development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060438", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23853, "identifier": "GO:1902237", "identifier_type": "str", "name": "positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902237", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23854, "identifier": "C0152253", "identifier_type": "str", "name": "Posterior synechiae of iris", "properties": { "url": "http://identifiers.org/umls/C0152253", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23855, "identifier": "59084", "identifier_type": "int", "name": "ENPP5", "properties": { "url": "http://identifiers.org/ncbigene/59084", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)" }, "metanode": "Gene" }, { "id": 23890, "identifier": "GO:0045080", "identifier_type": "str", "name": "positive regulation of chemokine biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045080", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23856, "identifier": "DB00784", "identifier_type": "str", "name": "Mefenamic acid", "properties": { "url": "http://www.drugbank.ca/drugs/DB00784", "inchi": "InChI=1S/C15H15NO2/c1-10-6-5-9-13(11(10)2)16-14-8-4-3-7-12(14)15(17)18/h3-9,16H,1-2H3,(H,17,18)", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=HYYBABOKPJLUIN-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 23857, "identifier": "GO:0048304", "identifier_type": "str", "name": "positive regulation of isotype switching to IgG isotypes", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048304", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23858, "identifier": "153562", "identifier_type": "int", "name": "MARVELD2", "properties": { "url": "http://identifiers.org/ncbigene/153562", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "MARVEL domain containing 2" }, "metanode": "Gene" }, { "id": 23859, "identifier": "N0000008859", "identifier_type": "str", "name": "Decreased Renal K+ Excretion", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000008859", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Physiologic Effect" }, "metanode": "Pharmacologic Class" }, { "id": 23860, "identifier": "GO:0002244", "identifier_type": "str", "name": "hematopoietic progenitor cell differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002244", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23861, "identifier": "C1142111", "identifier_type": "str", "name": "Eyelash discolouration", "properties": { "url": "http://identifiers.org/umls/C1142111", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23862, "identifier": "C0520837", "identifier_type": "str", "name": "Forced expiratory volume decreased", "properties": { "url": "http://identifiers.org/umls/C0520837", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 23863, "identifier": "5349", "identifier_type": "int", "name": "FXYD3", "properties": { "url": "http://identifiers.org/ncbigene/5349", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "FXYD domain containing ion transport regulator 3" }, "metanode": "Gene" }, { "id": 23864, "identifier": "GO:0052853", "identifier_type": "str", "name": "long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0052853", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 23865, "identifier": "116211", "identifier_type": "int", "name": "TM4SF19", "properties": { "url": "http://identifiers.org/ncbigene/116211", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "transmembrane 4 L six family member 19" }, "metanode": "Gene" }, { "id": 23866, "identifier": "GO:0032417", "identifier_type": "str", "name": "positive regulation of sodium:proton antiporter activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032417", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 23867, "identifier": "29100", "identifier_type": "int", "name": "TMEM208", "properties": { "url": "http://identifiers.org/ncbigene/29100", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "transmembrane protein 208" }, "metanode": "Gene" } ] }