Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=23975

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=24000",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=23950",
    "results": [
        {
            "id": 23969,
            "identifier": "126868",
            "identifier_type": "int",
            "name": "MAB21L3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/126868",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "mab-21-like 3 (C. elegans)"
            },
            "metanode": "Gene"
        },
        {
            "id": 23970,
            "identifier": "55894",
            "identifier_type": "int",
            "name": "DEFB103B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55894",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "defensin, beta 103B"
            },
            "metanode": "Gene"
        },
        {
            "id": 23971,
            "identifier": "GO:0021730",
            "identifier_type": "str",
            "name": "trigeminal sensory nucleus development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021730",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23972,
            "identifier": "GO:0034369",
            "identifier_type": "str",
            "name": "plasma lipoprotein particle remodeling",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034369",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23973,
            "identifier": "GO:0001162",
            "identifier_type": "str",
            "name": "RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001162",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 23974,
            "identifier": "256297",
            "identifier_type": "int",
            "name": "PTF1A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/256297",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "pancreas specific transcription factor, 1a"
            },
            "metanode": "Gene"
        },
        {
            "id": 23975,
            "identifier": "151871",
            "identifier_type": "int",
            "name": "DPPA2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/151871",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "developmental pluripotency associated 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 23976,
            "identifier": "151242",
            "identifier_type": "int",
            "name": "PPP1R1C",
            "properties": {
                "url": "http://identifiers.org/ncbigene/151242",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "protein phosphatase 1, regulatory (inhibitor) subunit 1C"
            },
            "metanode": "Gene"
        },
        {
            "id": 23977,
            "identifier": "432",
            "identifier_type": "int",
            "name": "ASGR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/432",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "asialoglycoprotein receptor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 23978,
            "identifier": "DB00169",
            "identifier_type": "str",
            "name": "Cholecalciferol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00169",
                "inchi": "InChI=1S/C27H44O/c1-19(2)8-6-9-21(4)25-15-16-26-22(10-7-17-27(25,26)5)12-13-23-18-24(28)14-11-20(23)3/h12-13,19,21,24-26,28H,3,6-11,14-18H2,1-2,4-5H3/b22-12+,23-13-/t21-,24+,25-,26+,27-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=QYSXJUFSXHHAJI-YRZJJWOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 23979,
            "identifier": "GO:0008206",
            "identifier_type": "str",
            "name": "bile acid metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008206",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23980,
            "identifier": "GO:0009219",
            "identifier_type": "str",
            "name": "pyrimidine deoxyribonucleotide metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009219",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23981,
            "identifier": "GO:0030321",
            "identifier_type": "str",
            "name": "transepithelial chloride transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030321",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23982,
            "identifier": "27034",
            "identifier_type": "int",
            "name": "ACAD8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27034",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "acyl-CoA dehydrogenase family, member 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 23983,
            "identifier": "3029",
            "identifier_type": "int",
            "name": "HAGH",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3029",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "hydroxyacylglutathione hydrolase"
            },
            "metanode": "Gene"
        },
        {
            "id": 23984,
            "identifier": "57590",
            "identifier_type": "int",
            "name": "WDFY1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57590",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "WD repeat and FYVE domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 23985,
            "identifier": "C0393593",
            "identifier_type": "str",
            "name": "Dystonia",
            "properties": {
                "url": "http://identifiers.org/umls/C0393593",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 23986,
            "identifier": "121512",
            "identifier_type": "int",
            "name": "FGD4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/121512",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "FYVE, RhoGEF and PH domain containing 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 23987,
            "identifier": "GO:0046959",
            "identifier_type": "str",
            "name": "habituation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046959",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23988,
            "identifier": "GO:0090529",
            "identifier_type": "str",
            "name": "cell septum assembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090529",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23989,
            "identifier": "PC7_4779",
            "identifier_type": "str",
            "name": "Interleukin-2 signaling",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 23990,
            "identifier": "105375667",
            "identifier_type": "int",
            "name": "LOC105375667",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105375667",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "uncharacterized LOC105375667"
            },
            "metanode": "Gene"
        },
        {
            "id": 23991,
            "identifier": "GO:0035787",
            "identifier_type": "str",
            "name": "cell migration involved in kidney development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035787",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 23992,
            "identifier": "23321",
            "identifier_type": "int",
            "name": "TRIM2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23321",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "tripartite motif containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 23993,
            "identifier": "GO:0030870",
            "identifier_type": "str",
            "name": "Mre11 complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030870",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        }
    ]
}