Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=24025

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=24050",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=24000",
    "results": [
        {
            "id": 24019,
            "identifier": "C0085622",
            "identifier_type": "str",
            "name": "Monoplegia",
            "properties": {
                "url": "http://identifiers.org/umls/C0085622",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 24020,
            "identifier": "D004418",
            "identifier_type": "str",
            "name": "Dyspnea, Paroxysmal",
            "properties": {
                "url": "http://identifiers.org/mesh/D004418",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 24021,
            "identifier": "GO:0045605",
            "identifier_type": "str",
            "name": "negative regulation of epidermal cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045605",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24022,
            "identifier": "659",
            "identifier_type": "int",
            "name": "BMPR2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/659",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "bone morphogenetic protein receptor, type II (serine/threonine kinase)"
            },
            "metanode": "Gene"
        },
        {
            "id": 24023,
            "identifier": "6744",
            "identifier_type": "int",
            "name": "SSFA2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6744",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "sperm specific antigen 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 24024,
            "identifier": "WP581_r67199",
            "identifier_type": "str",
            "name": "EPO Receptor Signaling",
            "properties": {
                "url": "http://www.wikipathways.org/instance/WP581_r67199",
                "source": "WikiPathways",
                "license": "CC BY 3.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 24025,
            "identifier": "GO:0001191",
            "identifier_type": "str",
            "name": "transcriptional repressor activity, RNA polymerase II transcription factor binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001191",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 24026,
            "identifier": "GO:0008528",
            "identifier_type": "str",
            "name": "G-protein coupled peptide receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008528",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 24027,
            "identifier": "102725205",
            "identifier_type": "int",
            "name": "LOC102725205",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102725205",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "uncharacterized LOC102725205"
            },
            "metanode": "Gene"
        },
        {
            "id": 24028,
            "identifier": "26133",
            "identifier_type": "int",
            "name": "TRPC4AP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26133",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "transient receptor potential cation channel, subfamily C, member 4 associated protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 24029,
            "identifier": "GO:0016259",
            "identifier_type": "str",
            "name": "selenocysteine metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016259",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24030,
            "identifier": "DB00193",
            "identifier_type": "str",
            "name": "Tramadol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00193",
                "inchi": "InChI=1S/C16H25NO2/c1-17(2)12-14-7-4-5-10-16(14,18)13-8-6-9-15(11-13)19-3/h6,8-9,11,14,18H,4-5,7,10,12H2,1-3H3/t14-,16+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=TVYLLZQTGLZFBW-ZBFHGGJFSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 24031,
            "identifier": "10083",
            "identifier_type": "int",
            "name": "USH1C",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10083",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "Usher syndrome 1C"
            },
            "metanode": "Gene"
        },
        {
            "id": 24032,
            "identifier": "DB00583",
            "identifier_type": "str",
            "name": "L-Carnitine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00583",
                "inchi": "InChI=1S/C7H15NO3/c1-8(2,3)5-6(9)4-7(10)11/h6,9H,4-5H2,1-3H3/t6-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=PHIQHXFUZVPYII-ZCFIWIBFSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 24033,
            "identifier": "C0085628",
            "identifier_type": "str",
            "name": "Stupor",
            "properties": {
                "url": "http://identifiers.org/umls/C0085628",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 24034,
            "identifier": "GO:0034382",
            "identifier_type": "str",
            "name": "chylomicron remnant clearance",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034382",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24035,
            "identifier": "128710",
            "identifier_type": "int",
            "name": "SLX4IP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/128710",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "SLX4 interacting protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 24036,
            "identifier": "GO:0042756",
            "identifier_type": "str",
            "name": "drinking behavior",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042756",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24037,
            "identifier": "GO:0010677",
            "identifier_type": "str",
            "name": "negative regulation of cellular carbohydrate metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010677",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24038,
            "identifier": "8440",
            "identifier_type": "int",
            "name": "NCK2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8440",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "NCK adaptor protein 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 24039,
            "identifier": "58478",
            "identifier_type": "int",
            "name": "ENOPH1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/58478",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "enolase-phosphatase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 24040,
            "identifier": "DB00222",
            "identifier_type": "str",
            "name": "Glimepiride",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00222",
                "inchi": "InChI=1S/C24H34N4O5S/c1-4-21-17(3)15-28(22(21)29)24(31)25-14-13-18-7-11-20(12-8-18)34(32,33)27-23(30)26-19-9-5-16(2)6-10-19/h7-8,11-12,16,19H,4-6,9-10,13-15H2,1-3H3,(H,25,31)(H2,26,27,30)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=WIGIZIANZCJQQY-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 24041,
            "identifier": "GO:0021631",
            "identifier_type": "str",
            "name": "optic nerve morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021631",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24042,
            "identifier": "152956",
            "identifier_type": "int",
            "name": "FLJ12425",
            "properties": {
                "url": "http://identifiers.org/ncbigene/152956",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "uncharacterized protein FLJ12425"
            },
            "metanode": "Gene"
        },
        {
            "id": 24043,
            "identifier": "2274",
            "identifier_type": "int",
            "name": "FHL2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2274",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "four and a half LIM domains 2"
            },
            "metanode": "Gene"
        }
    ]
}