Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=24200

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=24225",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=24175",
    "results": [
        {
            "id": 24194,
            "identifier": "GO:0051703",
            "identifier_type": "str",
            "name": "intraspecies interaction between organisms",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051703",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24195,
            "identifier": "GO:0070325",
            "identifier_type": "str",
            "name": "lipoprotein particle receptor binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070325",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 24196,
            "identifier": "56160",
            "identifier_type": "int",
            "name": "NDNL2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56160",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "necdin-like 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 24197,
            "identifier": "C0085136",
            "identifier_type": "str",
            "name": "Central nervous system neoplasm",
            "properties": {
                "url": "http://identifiers.org/umls/C0085136",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 24198,
            "identifier": "PC7_8716",
            "identifier_type": "str",
            "name": "Visual signal transduction: Rods",
            "properties": {
                "source": "PID via Pathway Commons",
                "license": "CC0 1.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 24199,
            "identifier": "DB00249",
            "identifier_type": "str",
            "name": "Idoxuridine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00249",
                "inchi": "InChI=1S/C9H11IN2O5/c10-4-2-12(9(16)11-8(4)15)7-1-5(14)6(3-13)17-7/h2,5-7,13-14H,1,3H2,(H,11,15,16)/t5-,6+,7+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=XQFRJNBWHJMXHO-RRKCRQDMSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 24200,
            "identifier": "202018",
            "identifier_type": "int",
            "name": "TAPT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/202018",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "transmembrane anterior posterior transformation 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 24201,
            "identifier": "79709",
            "identifier_type": "int",
            "name": "COLGALT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79709",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "collagen beta(1-O)galactosyltransferase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 24202,
            "identifier": "GO:0052151",
            "identifier_type": "str",
            "name": "positive regulation by symbiont of host apoptotic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052151",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24203,
            "identifier": "GO:0030212",
            "identifier_type": "str",
            "name": "hyaluronan metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030212",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24204,
            "identifier": "9349",
            "identifier_type": "int",
            "name": "RPL23",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9349",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "ribosomal protein L23"
            },
            "metanode": "Gene"
        },
        {
            "id": 24205,
            "identifier": "GO:1901618",
            "identifier_type": "str",
            "name": "organic hydroxy compound transmembrane transporter activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901618",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 24206,
            "identifier": "GO:0070172",
            "identifier_type": "str",
            "name": "positive regulation of tooth mineralization",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070172",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24207,
            "identifier": "100529240",
            "identifier_type": "int",
            "name": "ZNF816-ZNF321P",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100529240",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "ZNF816-ZNF321P readthrough"
            },
            "metanode": "Gene"
        },
        {
            "id": 24208,
            "identifier": "27316",
            "identifier_type": "int",
            "name": "RBMX",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27316",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "RNA binding motif protein, X-linked"
            },
            "metanode": "Gene"
        },
        {
            "id": 24209,
            "identifier": "57728",
            "identifier_type": "int",
            "name": "WDR19",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57728",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "WD repeat domain 19"
            },
            "metanode": "Gene"
        },
        {
            "id": 24210,
            "identifier": "GO:0019060",
            "identifier_type": "str",
            "name": "intracellular transport of viral protein in host cell",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0019060",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24211,
            "identifier": "C0700200",
            "identifier_type": "str",
            "name": "Presyncope",
            "properties": {
                "url": "http://identifiers.org/umls/C0700200",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 24212,
            "identifier": "GO:0004923",
            "identifier_type": "str",
            "name": "leukemia inhibitory factor receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004923",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 24213,
            "identifier": "GO:1901994",
            "identifier_type": "str",
            "name": "negative regulation of meiotic cell cycle phase transition",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901994",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 24214,
            "identifier": "5636",
            "identifier_type": "int",
            "name": "PRPSAP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5636",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "phosphoribosyl pyrophosphate synthetase-associated protein 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 24215,
            "identifier": "51690",
            "identifier_type": "int",
            "name": "LSM7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51690",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 24216,
            "identifier": "PC7_1532",
            "identifier_type": "str",
            "name": "Activation of G protein gated Potassium channels",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 24217,
            "identifier": "90737",
            "identifier_type": "int",
            "name": "PAGE5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/90737",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "P antigen family, member 5 (prostate associated)"
            },
            "metanode": "Gene"
        },
        {
            "id": 24218,
            "identifier": "DB09015",
            "identifier_type": "str",
            "name": "Potassium Canrenoate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB09015",
                "inchi": "InChI=1/C22H30O4.K/c1-20-9-5-15(23)13-14(20)3-4-16-17(20)6-10-21(2)18(16)7-11-22(21,26)12-8-19(24)25;/h3-4,13,16-18,26H,5-12H2,1-2H3,(H,24,25);/q;+1/p-1/t16-,17+,18+,20+,21+,22-;/s2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JTZQCHFUGHIPDF-IJYBFQDMNA-M"
            },
            "metanode": "Compound"
        }
    ]
}