Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=2425
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=2450", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=2400", "results": [ { "id": 2415, "identifier": "GO:1902108", "identifier_type": "str", "name": "regulation of mitochondrial membrane permeability involved in apoptotic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902108", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 2416, "identifier": "C0455769", "identifier_type": "str", "name": "Energy increased", "properties": { "url": "http://identifiers.org/umls/C0455769", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 2417, "identifier": "GO:0046889", "identifier_type": "str", "name": "positive regulation of lipid biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046889", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 2418, "identifier": "9135", "identifier_type": "int", "name": "RABEP1", "properties": { "url": "http://identifiers.org/ncbigene/9135", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "rabaptin, RAB GTPase binding effector protein 1" }, "metanode": "Gene" }, { "id": 2419, "identifier": "50650", "identifier_type": "int", "name": "ARHGEF3", "properties": { "url": "http://identifiers.org/ncbigene/50650", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "Rho guanine nucleotide exchange factor (GEF) 3" }, "metanode": "Gene" }, { "id": 2420, "identifier": "219899", "identifier_type": "int", "name": "TBCEL", "properties": { "url": "http://identifiers.org/ncbigene/219899", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "tubulin folding cofactor E-like" }, "metanode": "Gene" }, { "id": 2421, "identifier": "5291", "identifier_type": "int", "name": "PIK3CB", "properties": { "url": "http://identifiers.org/ncbigene/5291", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta" }, "metanode": "Gene" }, { "id": 2422, "identifier": "27230", "identifier_type": "int", "name": "SERP1", "properties": { "url": "http://identifiers.org/ncbigene/27230", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "stress-associated endoplasmic reticulum protein 1" }, "metanode": "Gene" }, { "id": 2423, "identifier": "2953", "identifier_type": "int", "name": "GSTT2", "properties": { "url": "http://identifiers.org/ncbigene/2953", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "glutathione S-transferase theta 2 (gene/pseudogene)" }, "metanode": "Gene" }, { "id": 2424, "identifier": "57514", "identifier_type": "int", "name": "ARHGAP31", "properties": { "url": "http://identifiers.org/ncbigene/57514", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "Rho GTPase activating protein 31" }, "metanode": "Gene" }, { "id": 2425, "identifier": "GO:0032783", "identifier_type": "str", "name": "ELL-EAF complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032783", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 38042, "identifier": "PC7_2379", "identifier_type": "str", "name": "CYP2E1 reactions", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 2426, "identifier": "80177", "identifier_type": "int", "name": "MYCT1", "properties": { "url": "http://identifiers.org/ncbigene/80177", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "myc target 1" }, "metanode": "Gene" }, { "id": 2427, "identifier": "5422", "identifier_type": "int", "name": "POLA1", "properties": { "url": "http://identifiers.org/ncbigene/5422", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "polymerase (DNA directed), alpha 1, catalytic subunit" }, "metanode": "Gene" }, { "id": 2428, "identifier": "51348", "identifier_type": "int", "name": "KLRF1", "properties": { "url": "http://identifiers.org/ncbigene/51348", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "killer cell lectin-like receptor subfamily F, member 1" }, "metanode": "Gene" }, { "id": 2429, "identifier": "GO:1990124", "identifier_type": "str", "name": "messenger ribonucleoprotein complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1990124", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 2430, "identifier": "GO:0048273", "identifier_type": "str", "name": "mitogen-activated protein kinase p38 binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048273", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 2431, "identifier": "23517", "identifier_type": "int", "name": "SKIV2L2", "properties": { "url": "http://identifiers.org/ncbigene/23517", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "superkiller viralicidic activity 2-like 2 (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 2432, "identifier": "84229", "identifier_type": "int", "name": "DRC7", "properties": { "url": "http://identifiers.org/ncbigene/84229", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "dynein regulatory complex subunit 7" }, "metanode": "Gene" }, { "id": 2433, "identifier": "N0000009010", "identifier_type": "str", "name": "Decreased Tracheobronchial Stretch Receptor Activity", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000009010", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Physiologic Effect" }, "metanode": "Pharmacologic Class" }, { "id": 2434, "identifier": "114769", "identifier_type": "int", "name": "CARD16", "properties": { "url": "http://identifiers.org/ncbigene/114769", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "caspase recruitment domain family, member 16" }, "metanode": "Gene" }, { "id": 2435, "identifier": "PC7_8725", "identifier_type": "str", "name": "Vitamin C (ascorbate) metabolism", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 2436, "identifier": "6360", "identifier_type": "int", "name": "CCL16", "properties": { "url": "http://identifiers.org/ncbigene/6360", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "chemokine (C-C motif) ligand 16" }, "metanode": "Gene" }, { "id": 2437, "identifier": "PC7_7493", "identifier_type": "str", "name": "Signaling events mediated by PTP1B", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 2438, "identifier": "341947", "identifier_type": "int", "name": "COX8C", "properties": { "url": "http://identifiers.org/ncbigene/341947", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "cytochrome c oxidase subunit VIIIC" }, "metanode": "Gene" } ] }