Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=250

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=275",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=225",
    "results": [
        {
            "id": 249,
            "identifier": "1655",
            "identifier_type": "int",
            "name": "DDX5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1655",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "DEAD (Asp-Glu-Ala-Asp) box helicase 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 250,
            "identifier": "GO:0034418",
            "identifier_type": "str",
            "name": "urate biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034418",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 252,
            "identifier": "DB00833",
            "identifier_type": "str",
            "name": "Cefaclor",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00833",
                "inchi": "InChI=1S/C15H14ClN3O4S/c16-8-6-24-14-10(13(21)19(14)11(8)15(22)23)18-12(20)9(17)7-4-2-1-3-5-7/h1-5,9-10,14H,6,17H2,(H,18,20)(H,22,23)/t9-,10-,14-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=QYIYFLOTGYLRGG-GPCCPHFNSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 253,
            "identifier": "C0016508",
            "identifier_type": "str",
            "name": "Congenital foot malformation",
            "properties": {
                "url": "http://identifiers.org/umls/C0016508",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 254,
            "identifier": "GO:0009838",
            "identifier_type": "str",
            "name": "abscission",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009838",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 255,
            "identifier": "646627",
            "identifier_type": "int",
            "name": "LYPD8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/646627",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "LY6/PLAUR domain containing 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 256,
            "identifier": "GO:0070666",
            "identifier_type": "str",
            "name": "regulation of mast cell proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070666",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 257,
            "identifier": "24148",
            "identifier_type": "int",
            "name": "PRPF6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/24148",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "pre-mRNA processing factor 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 258,
            "identifier": "GO:2000043",
            "identifier_type": "str",
            "name": "regulation of cardiac cell fate specification",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000043",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 259,
            "identifier": "144245",
            "identifier_type": "int",
            "name": "ALG10B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/144245",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "ALG10B, alpha-1,2-glucosyltransferase"
            },
            "metanode": "Gene"
        },
        {
            "id": 260,
            "identifier": "54432",
            "identifier_type": "int",
            "name": "YIPF1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54432",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "Yip1 domain family, member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 261,
            "identifier": "GO:0019730",
            "identifier_type": "str",
            "name": "antimicrobial humoral response",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0019730",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 262,
            "identifier": "84988",
            "identifier_type": "int",
            "name": "PPP1R16A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84988",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "protein phosphatase 1, regulatory subunit 16A"
            },
            "metanode": "Gene"
        },
        {
            "id": 263,
            "identifier": "C1994994",
            "identifier_type": "str",
            "name": "Excessive thirst",
            "properties": {
                "url": "http://identifiers.org/umls/C1994994",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 264,
            "identifier": "7007",
            "identifier_type": "int",
            "name": "TECTA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7007",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "tectorin alpha"
            },
            "metanode": "Gene"
        },
        {
            "id": 265,
            "identifier": "GO:0035877",
            "identifier_type": "str",
            "name": "death effector domain binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035877",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 266,
            "identifier": "GO:0036003",
            "identifier_type": "str",
            "name": "positive regulation of transcription from RNA polymerase II promoter in response to stress",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0036003",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 267,
            "identifier": "25844",
            "identifier_type": "int",
            "name": "YIPF3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/25844",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "Yip1 domain family, member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 268,
            "identifier": "1583",
            "identifier_type": "int",
            "name": "CYP11A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1583",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "cytochrome P450, family 11, subfamily A, polypeptide 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 269,
            "identifier": "DB00748",
            "identifier_type": "str",
            "name": "Carbinoxamine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00748",
                "inchi": "InChI=1S/C16H19ClN2O/c1-19(2)11-12-20-16(15-5-3-4-10-18-15)13-6-8-14(17)9-7-13/h3-10,16H,11-12H2,1-2H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=OJFSXZCBGQGRNV-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 270,
            "identifier": "PC7_5537",
            "identifier_type": "str",
            "name": "Molecules associated with elastic fibres",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 271,
            "identifier": "89782",
            "identifier_type": "int",
            "name": "LMLN",
            "properties": {
                "url": "http://identifiers.org/ncbigene/89782",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "leishmanolysin-like (metallopeptidase M8 family)"
            },
            "metanode": "Gene"
        },
        {
            "id": 272,
            "identifier": "105379645",
            "identifier_type": "int",
            "name": "LOC105379645",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105379645",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "killer cell immunoglobulin-like receptor 2DL2"
            },
            "metanode": "Gene"
        },
        {
            "id": 273,
            "identifier": "8703",
            "identifier_type": "int",
            "name": "B4GALT3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8703",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 274,
            "identifier": "GO:2000386",
            "identifier_type": "str",
            "name": "positive regulation of ovarian follicle development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000386",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}