Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=25500
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=25525", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=25475", "results": [ { "id": 25492, "identifier": "GO:0021537", "identifier_type": "str", "name": "telencephalon development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0021537", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25493, "identifier": "54495", "identifier_type": "int", "name": "TMX3", "properties": { "url": "http://identifiers.org/ncbigene/54495", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "thioredoxin-related transmembrane protein 3" }, "metanode": "Gene" }, { "id": 25494, "identifier": "PC7_8667", "identifier_type": "str", "name": "VEGFR2 mediated vascular permeability", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 25495, "identifier": "PC7_2252", "identifier_type": "str", "name": "CD28 dependent PI3K/Akt signaling", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 25496, "identifier": "GO:0045793", "identifier_type": "str", "name": "positive regulation of cell size", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045793", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25497, "identifier": "115207", "identifier_type": "int", "name": "KCTD12", "properties": { "url": "http://identifiers.org/ncbigene/115207", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "potassium channel tetramerization domain containing 12" }, "metanode": "Gene" }, { "id": 25498, "identifier": "DB00806", "identifier_type": "str", "name": "Pentoxifylline", "properties": { "url": "http://www.drugbank.ca/drugs/DB00806", "inchi": "InChI=1S/C13H18N4O3/c1-9(18)6-4-5-7-17-12(19)10-11(14-8-15(10)2)16(3)13(17)20/h8H,4-7H2,1-3H3", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=BYPFEZZEUUWMEJ-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 25499, "identifier": "GO:1900740", "identifier_type": "str", "name": "positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1900740", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25500, "identifier": "56948", "identifier_type": "int", "name": "SDR39U1", "properties": { "url": "http://identifiers.org/ncbigene/56948", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "short chain dehydrogenase/reductase family 39U, member 1" }, "metanode": "Gene" }, { "id": 25501, "identifier": "196527", "identifier_type": "int", "name": "ANO6", "properties": { "url": "http://identifiers.org/ncbigene/196527", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "anoctamin 6" }, "metanode": "Gene" }, { "id": 25502, "identifier": "388567", "identifier_type": "int", "name": "ZNF749", "properties": { "url": "http://identifiers.org/ncbigene/388567", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 749" }, "metanode": "Gene" }, { "id": 25503, "identifier": "1630", "identifier_type": "int", "name": "DCC", "properties": { "url": "http://identifiers.org/ncbigene/1630", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "DCC netrin 1 receptor" }, "metanode": "Gene" }, { "id": 25504, "identifier": "10121", "identifier_type": "int", "name": "ACTR1A", "properties": { "url": "http://identifiers.org/ncbigene/10121", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)" }, "metanode": "Gene" }, { "id": 25505, "identifier": "63940", "identifier_type": "int", "name": "GPSM3", "properties": { "url": "http://identifiers.org/ncbigene/63940", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "G-protein signaling modulator 3" }, "metanode": "Gene" }, { "id": 25506, "identifier": "D004314", "identifier_type": "str", "name": "Down Syndrome", "properties": { "url": "http://identifiers.org/mesh/D004314", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 25507, "identifier": "GO:0034110", "identifier_type": "str", "name": "regulation of homotypic cell-cell adhesion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0034110", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25508, "identifier": "105370929", "identifier_type": "int", "name": "LOC105370929", "properties": { "url": "http://identifiers.org/ncbigene/105370929", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "homeobox protein Hox-D11-like" }, "metanode": "Gene" }, { "id": 25509, "identifier": "128876", "identifier_type": "int", "name": "FAM83C", "properties": { "url": "http://identifiers.org/ncbigene/128876", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "family with sequence similarity 83, member C" }, "metanode": "Gene" }, { "id": 25510, "identifier": "128611", "identifier_type": "int", "name": "ZNF831", "properties": { "url": "http://identifiers.org/ncbigene/128611", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "zinc finger protein 831" }, "metanode": "Gene" }, { "id": 25511, "identifier": "GO:0051584", "identifier_type": "str", "name": "regulation of dopamine uptake involved in synaptic transmission", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051584", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25512, "identifier": "58516", "identifier_type": "int", "name": "FAM60A", "properties": { "url": "http://identifiers.org/ncbigene/58516", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "family with sequence similarity 60, member A" }, "metanode": "Gene" }, { "id": 25513, "identifier": "GO:0042579", "identifier_type": "str", "name": "microbody", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042579", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 25514, "identifier": "253782", "identifier_type": "int", "name": "CERS6", "properties": { "url": "http://identifiers.org/ncbigene/253782", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "ceramide synthase 6" }, "metanode": "Gene" }, { "id": 25515, "identifier": "2312", "identifier_type": "int", "name": "FLG", "properties": { "url": "http://identifiers.org/ncbigene/2312", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "filaggrin" }, "metanode": "Gene" }, { "id": 25516, "identifier": "11075", "identifier_type": "int", "name": "STMN2", "properties": { "url": "http://identifiers.org/ncbigene/11075", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "stathmin 2" }, "metanode": "Gene" } ] }