Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=25775

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=25800",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=25750",
    "results": [
        {
            "id": 25767,
            "identifier": "GO:0051093",
            "identifier_type": "str",
            "name": "negative regulation of developmental process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051093",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 25768,
            "identifier": "GO:0070587",
            "identifier_type": "str",
            "name": "regulation of cell-cell adhesion involved in gastrulation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070587",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 25769,
            "identifier": "80270",
            "identifier_type": "int",
            "name": "HSD3B7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80270",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 25770,
            "identifier": "154007",
            "identifier_type": "int",
            "name": "SNRNP48",
            "properties": {
                "url": "http://identifiers.org/ncbigene/154007",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "small nuclear ribonucleoprotein 48kDa (U11/U12)"
            },
            "metanode": "Gene"
        },
        {
            "id": 25771,
            "identifier": "29760",
            "identifier_type": "int",
            "name": "BLNK",
            "properties": {
                "url": "http://identifiers.org/ncbigene/29760",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "B-cell linker"
            },
            "metanode": "Gene"
        },
        {
            "id": 25772,
            "identifier": "5627",
            "identifier_type": "int",
            "name": "PROS1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5627",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "protein S (alpha)"
            },
            "metanode": "Gene"
        },
        {
            "id": 25773,
            "identifier": "167127",
            "identifier_type": "int",
            "name": "UGT3A2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/167127",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "UDP glycosyltransferase 3 family, polypeptide A2"
            },
            "metanode": "Gene"
        },
        {
            "id": 25774,
            "identifier": "GO:0003072",
            "identifier_type": "str",
            "name": "renal control of peripheral vascular resistance involved in regulation of systemic arterial blood pressure",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0003072",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 25775,
            "identifier": "GO:0070165",
            "identifier_type": "str",
            "name": "positive regulation of adiponectin secretion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070165",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 25776,
            "identifier": "GO:0006051",
            "identifier_type": "str",
            "name": "N-acetylmannosamine metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006051",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 25777,
            "identifier": "GO:0008665",
            "identifier_type": "str",
            "name": "2'-phosphotransferase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008665",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 25778,
            "identifier": "23466",
            "identifier_type": "int",
            "name": "CBX6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23466",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "chromobox homolog 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 25779,
            "identifier": "GO:0060242",
            "identifier_type": "str",
            "name": "contact inhibition",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060242",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 25780,
            "identifier": "245806",
            "identifier_type": "int",
            "name": "VGLL2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/245806",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "vestigial-like family member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 25781,
            "identifier": "105374297",
            "identifier_type": "int",
            "name": "LOC105374297",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105374297",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "uncharacterized LOC105374297"
            },
            "metanode": "Gene"
        },
        {
            "id": 25782,
            "identifier": "79879",
            "identifier_type": "int",
            "name": "CCDC134",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79879",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "coiled-coil domain containing 134"
            },
            "metanode": "Gene"
        },
        {
            "id": 26033,
            "identifier": "PC7_3699",
            "identifier_type": "str",
            "name": "ErbB2/ErbB3 signaling events",
            "properties": {
                "source": "PID via Pathway Commons",
                "license": "CC0 1.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 25783,
            "identifier": "DB00429",
            "identifier_type": "str",
            "name": "Carboprost Tromethamine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00429",
                "inchi": "InChI=1S/C21H36O5.C4H11NO3/c1-3-4-9-13-21(2,26)14-12-17-16(18(22)15-19(17)23)10-7-5-6-8-11-20(24)25;5-4(1-6,2-7)3-8/h5,7,12,14,16-19,22-23,26H,3-4,6,8-11,13,15H2,1-2H3,(H,24,25);6-8H,1-3,5H2/b7-5-,14-12+;/t16-,17-,18+,19+,21+;/m1./s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=UMMADZJLZAPZAW-OVXHCKHTSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 25784,
            "identifier": "C0740435",
            "identifier_type": "str",
            "name": "Bilirubin unconjugated increased",
            "properties": {
                "url": "http://identifiers.org/umls/C0740435",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 25785,
            "identifier": "GO:0017002",
            "identifier_type": "str",
            "name": "activin-activated receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0017002",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 25786,
            "identifier": "102724770",
            "identifier_type": "int",
            "name": "LOC102724770",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724770",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "protein DGCR6"
            },
            "metanode": "Gene"
        },
        {
            "id": 25787,
            "identifier": "GO:1901860",
            "identifier_type": "str",
            "name": "positive regulation of mitochondrial DNA metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901860",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 25788,
            "identifier": "125950",
            "identifier_type": "int",
            "name": "RAVER1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/125950",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "ribonucleoprotein, PTB-binding 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 25789,
            "identifier": "GO:0004557",
            "identifier_type": "str",
            "name": "alpha-galactosidase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004557",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 25790,
            "identifier": "GO:0005637",
            "identifier_type": "str",
            "name": "nuclear inner membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005637",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        }
    ]
}