Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=25925
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=25950", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=25900", "results": [ { "id": 25917, "identifier": "7038", "identifier_type": "int", "name": "TG", "properties": { "url": "http://identifiers.org/ncbigene/7038", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "thyroglobulin" }, "metanode": "Gene" }, { "id": 25918, "identifier": "GO:1902309", "identifier_type": "str", "name": "negative regulation of peptidyl-serine dephosphorylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902309", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25919, "identifier": "C0877324", "identifier_type": "str", "name": "Urinary sediment present", "properties": { "url": "http://identifiers.org/umls/C0877324", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 25920, "identifier": "PC7_3084", "identifier_type": "str", "name": "Developmental Biology", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 25921, "identifier": "GO:0032447", "identifier_type": "str", "name": "protein urmylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032447", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25922, "identifier": "3091", "identifier_type": "int", "name": "HIF1A", "properties": { "url": "http://identifiers.org/ncbigene/3091", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)" }, "metanode": "Gene" }, { "id": 25923, "identifier": "1742", "identifier_type": "int", "name": "DLG4", "properties": { "url": "http://identifiers.org/ncbigene/1742", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "discs, large homolog 4 (Drosophila)" }, "metanode": "Gene" }, { "id": 25924, "identifier": "63924", "identifier_type": "int", "name": "CIDEC", "properties": { "url": "http://identifiers.org/ncbigene/63924", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "cell death-inducing DFFA-like effector c" }, "metanode": "Gene" }, { "id": 25925, "identifier": "89941", "identifier_type": "int", "name": "RHOT2", "properties": { "url": "http://identifiers.org/ncbigene/89941", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "ras homolog family member T2" }, "metanode": "Gene" }, { "id": 25926, "identifier": "51545", "identifier_type": "int", "name": "ZNF581", "properties": { "url": "http://identifiers.org/ncbigene/51545", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 581" }, "metanode": "Gene" }, { "id": 25927, "identifier": "C0438242", "identifier_type": "str", "name": "Blood urea abnormal", "properties": { "url": "http://identifiers.org/umls/C0438242", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 25928, "identifier": "23499", "identifier_type": "int", "name": "MACF1", "properties": { "url": "http://identifiers.org/ncbigene/23499", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "microtubule-actin crosslinking factor 1" }, "metanode": "Gene" }, { "id": 25929, "identifier": "GO:0003896", "identifier_type": "str", "name": "DNA primase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0003896", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 25930, "identifier": "WP2864_r79278", "identifier_type": "str", "name": "Apoptosis-related network due to altered Notch3 in ovarian cancer", "properties": { "url": "http://www.wikipathways.org/instance/WP2864_r79278", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 25931, "identifier": "GO:0000139", "identifier_type": "str", "name": "Golgi membrane", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0000139", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 25932, "identifier": "GO:0090175", "identifier_type": "str", "name": "regulation of establishment of planar polarity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0090175", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25933, "identifier": "C0410919", "identifier_type": "str", "name": "Bradycardia foetal", "properties": { "url": "http://identifiers.org/umls/C0410919", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 25934, "identifier": "105378161", "identifier_type": "int", "name": "LOC105378161", "properties": { "url": "http://identifiers.org/ncbigene/105378161", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "uncharacterized LOC105378161" }, "metanode": "Gene" }, { "id": 25935, "identifier": "GO:0006182", "identifier_type": "str", "name": "cGMP biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006182", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25936, "identifier": "157773", "identifier_type": "int", "name": "C8orf48", "properties": { "url": "http://identifiers.org/ncbigene/157773", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "chromosome 8 open reading frame 48" }, "metanode": "Gene" }, { "id": 25937, "identifier": "C0154002", "identifier_type": "str", "name": "Benign vaginal neoplasm", "properties": { "url": "http://identifiers.org/umls/C0154002", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 25938, "identifier": "11059", "identifier_type": "int", "name": "WWP1", "properties": { "url": "http://identifiers.org/ncbigene/11059", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "WW domain containing E3 ubiquitin protein ligase 1" }, "metanode": "Gene" }, { "id": 25939, "identifier": "GO:0010799", "identifier_type": "str", "name": "regulation of peptidyl-threonine phosphorylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010799", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 25940, "identifier": "C0740277", "identifier_type": "str", "name": "Bile duct cancer", "properties": { "url": "http://identifiers.org/umls/C0740277", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 25941, "identifier": "GO:0035337", "identifier_type": "str", "name": "fatty-acyl-CoA metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035337", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }