Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=26250

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=26275",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=26225",
    "results": [
        {
            "id": 26244,
            "identifier": "22839",
            "identifier_type": "int",
            "name": "DLGAP4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/22839",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "discs, large (Drosophila) homolog-associated protein 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 26245,
            "identifier": "GO:0048298",
            "identifier_type": "str",
            "name": "positive regulation of isotype switching to IgA isotypes",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048298",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26246,
            "identifier": "GO:0045182",
            "identifier_type": "str",
            "name": "translation regulator activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045182",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 26247,
            "identifier": "GO:0045839",
            "identifier_type": "str",
            "name": "negative regulation of mitotic nuclear division",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045839",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26248,
            "identifier": "642475",
            "identifier_type": "int",
            "name": "MROH6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/642475",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "maestro heat-like repeat family member 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 26249,
            "identifier": "391114",
            "identifier_type": "int",
            "name": "OR6K3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/391114",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "olfactory receptor, family 6, subfamily K, member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 26250,
            "identifier": "148252",
            "identifier_type": "int",
            "name": "DIRAS1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/148252",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "DIRAS family, GTP-binding RAS-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 26251,
            "identifier": "55704",
            "identifier_type": "int",
            "name": "CCDC88A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55704",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "coiled-coil domain containing 88A"
            },
            "metanode": "Gene"
        },
        {
            "id": 26252,
            "identifier": "493829",
            "identifier_type": "int",
            "name": "TRIM72",
            "properties": {
                "url": "http://identifiers.org/ncbigene/493829",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "tripartite motif containing 72, E3 ubiquitin protein ligase"
            },
            "metanode": "Gene"
        },
        {
            "id": 26253,
            "identifier": "GO:0006820",
            "identifier_type": "str",
            "name": "anion transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006820",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26254,
            "identifier": "GO:0052510",
            "identifier_type": "str",
            "name": "positive regulation by organism of defense response of other organism involved in symbiotic interaction",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052510",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26255,
            "identifier": "PC7_8356",
            "identifier_type": "str",
            "name": "Transport of nucleotide sugars",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 26256,
            "identifier": "1666",
            "identifier_type": "int",
            "name": "DECR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1666",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "2,4-dienoyl CoA reductase 1, mitochondrial"
            },
            "metanode": "Gene"
        },
        {
            "id": 26257,
            "identifier": "150763",
            "identifier_type": "int",
            "name": "GPAT2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/150763",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "glycerol-3-phosphate acyltransferase 2, mitochondrial"
            },
            "metanode": "Gene"
        },
        {
            "id": 26258,
            "identifier": "9021",
            "identifier_type": "int",
            "name": "SOCS3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9021",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "suppressor of cytokine signaling 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 26259,
            "identifier": "PC7_7723",
            "identifier_type": "str",
            "name": "Synthesis and interconversion of nucleotide di- and triphosphates",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 26260,
            "identifier": "81706",
            "identifier_type": "int",
            "name": "PPP1R14C",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81706",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "protein phosphatase 1, regulatory (inhibitor) subunit 14C"
            },
            "metanode": "Gene"
        },
        {
            "id": 26261,
            "identifier": "DB06684",
            "identifier_type": "str",
            "name": "Vilazodone",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06684",
                "inchi": "InChI=1S/C26H27N5O2/c27-16-18-4-6-23-22(13-18)19(17-29-23)3-1-2-8-30-9-11-31(12-10-30)21-5-7-24-20(14-21)15-25(33-24)26(28)32/h4-7,13-15,17,29H,1-3,8-12H2,(H2,28,32)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=SGEGOXDYSFKCPT-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 26262,
            "identifier": "PC7_3960",
            "identifier_type": "str",
            "name": "Formation of HIV-1 elongation complex containing HIV-1 Tat",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 26263,
            "identifier": "83417",
            "identifier_type": "int",
            "name": "FCRL4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/83417",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "Fc receptor-like 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 26264,
            "identifier": "80207",
            "identifier_type": "int",
            "name": "OPA3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80207",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)"
            },
            "metanode": "Gene"
        },
        {
            "id": 26265,
            "identifier": "C1536074",
            "identifier_type": "str",
            "name": "Osteoarticular pain",
            "properties": {
                "url": "http://identifiers.org/umls/C1536074",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 26266,
            "identifier": "5308",
            "identifier_type": "int",
            "name": "PITX2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5308",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "paired-like homeodomain 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 26267,
            "identifier": "51234",
            "identifier_type": "int",
            "name": "EMC4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51234",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "ER membrane protein complex subunit 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 26268,
            "identifier": "GO:0050890",
            "identifier_type": "str",
            "name": "cognition",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0050890",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}