Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=26275

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=26300",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=26250",
    "results": [
        {
            "id": 26269,
            "identifier": "4863",
            "identifier_type": "int",
            "name": "NPAT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4863",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "nuclear protein, ataxia-telangiectasia locus"
            },
            "metanode": "Gene"
        },
        {
            "id": 26270,
            "identifier": "255877",
            "identifier_type": "int",
            "name": "BCL6B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/255877",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "B-cell CLL/lymphoma 6, member B"
            },
            "metanode": "Gene"
        },
        {
            "id": 26271,
            "identifier": "GO:2001238",
            "identifier_type": "str",
            "name": "positive regulation of extrinsic apoptotic signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2001238",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26272,
            "identifier": "23403",
            "identifier_type": "int",
            "name": "FBXO46",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23403",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "F-box protein 46"
            },
            "metanode": "Gene"
        },
        {
            "id": 26273,
            "identifier": "53831",
            "identifier_type": "int",
            "name": "GPR84",
            "properties": {
                "url": "http://identifiers.org/ncbigene/53831",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "G protein-coupled receptor 84"
            },
            "metanode": "Gene"
        },
        {
            "id": 26274,
            "identifier": "DB01336",
            "identifier_type": "str",
            "name": "Metocurine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01336",
                "inchi": "InChI=1S/C40H48N2O6/c1-41(2)17-15-27-22-34(44-6)36-24-30(27)31(41)19-25-9-12-29(13-10-25)47-40-38-28(23-37(45-7)39(40)46-8)16-18-42(3,4)32(38)20-26-11-14-33(43-5)35(21-26)48-36/h9-14,21-24,31-32H,15-20H2,1-8H3/q+2/t31-,32+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JFXBEKISTKFVAB-AJQTZOPKSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 26275,
            "identifier": "GO:1903381",
            "identifier_type": "str",
            "name": "regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903381",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26276,
            "identifier": "N0000191272",
            "identifier_type": "str",
            "name": "UGT1A1 Inhibitors",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000191272",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Mechanism of Action"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 26277,
            "identifier": "6262",
            "identifier_type": "int",
            "name": "RYR2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6262",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "ryanodine receptor 2 (cardiac)"
            },
            "metanode": "Gene"
        },
        {
            "id": 26278,
            "identifier": "57140",
            "identifier_type": "int",
            "name": "RNPEPL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57140",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "arginyl aminopeptidase (aminopeptidase B)-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 26279,
            "identifier": "25885",
            "identifier_type": "int",
            "name": "POLR1A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/25885",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "polymerase (RNA) I polypeptide A, 194kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 26280,
            "identifier": "79817",
            "identifier_type": "int",
            "name": "MOB3B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79817",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "MOB kinase activator 3B"
            },
            "metanode": "Gene"
        },
        {
            "id": 26281,
            "identifier": "C0019147",
            "identifier_type": "str",
            "name": "Coma hepatic",
            "properties": {
                "url": "http://identifiers.org/umls/C0019147",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 26282,
            "identifier": "100526783",
            "identifier_type": "int",
            "name": "C15orf38-AP3S2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100526783",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "C15orf38-AP3S2 readthrough"
            },
            "metanode": "Gene"
        },
        {
            "id": 26283,
            "identifier": "966",
            "identifier_type": "int",
            "name": "CD59",
            "properties": {
                "url": "http://identifiers.org/ncbigene/966",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "CD59 molecule, complement regulatory protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 26284,
            "identifier": "9585",
            "identifier_type": "int",
            "name": "KIF20B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9585",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "kinesin family member 20B"
            },
            "metanode": "Gene"
        },
        {
            "id": 26285,
            "identifier": "GO:0048757",
            "identifier_type": "str",
            "name": "pigment granule maturation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048757",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26286,
            "identifier": "DB00823",
            "identifier_type": "str",
            "name": "Ethynodiol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00823",
                "inchi": "InChI=1S/C24H32O4/c1-5-24(28-16(3)26)13-11-22-21-8-6-17-14-18(27-15(2)25)7-9-19(17)20(21)10-12-23(22,24)4/h1,14,18-22H,6-13H2,2-4H3/t18-,19-,20+,21+,22-,23-,24-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ONKUMRGIYFNPJW-KIEAKMPYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 26287,
            "identifier": "GO:0040023",
            "identifier_type": "str",
            "name": "establishment of nucleus localization",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0040023",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26288,
            "identifier": "DB00673",
            "identifier_type": "str",
            "name": "Aprepitant",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00673",
                "inchi": "InChI=1S/C23H21F7N4O3/c1-12(14-8-15(22(25,26)27)10-16(9-14)23(28,29)30)37-20-19(13-2-4-17(24)5-3-13)34(6-7-36-20)11-18-31-21(35)33-32-18/h2-5,8-10,12,19-20H,6-7,11H2,1H3,(H2,31,32,33,35)/t12-,19+,20-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ATALOFNDEOCMKK-OITMNORJSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 26289,
            "identifier": "3419",
            "identifier_type": "int",
            "name": "IDH3A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3419",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "isocitrate dehydrogenase 3 (NAD+) alpha"
            },
            "metanode": "Gene"
        },
        {
            "id": 26290,
            "identifier": "GO:0061045",
            "identifier_type": "str",
            "name": "negative regulation of wound healing",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061045",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26291,
            "identifier": "PC7_6925",
            "identifier_type": "str",
            "name": "Release of Hh-Np from the secreting cell",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 26292,
            "identifier": "GO:0015870",
            "identifier_type": "str",
            "name": "acetylcholine transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015870",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 26293,
            "identifier": "GO:0035791",
            "identifier_type": "str",
            "name": "platelet-derived growth factor receptor-beta signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035791",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}