Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=27100

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=27125",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=27075",
    "results": [
        {
            "id": 27092,
            "identifier": "7097",
            "identifier_type": "int",
            "name": "TLR2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7097",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "toll-like receptor 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 27093,
            "identifier": "GO:0032372",
            "identifier_type": "str",
            "name": "negative regulation of sterol transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032372",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27094,
            "identifier": "57135",
            "identifier_type": "int",
            "name": "DAZ4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57135",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "Y",
                "description": "deleted in azoospermia 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 27095,
            "identifier": "GO:1900039",
            "identifier_type": "str",
            "name": "positive regulation of cellular response to hypoxia",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1900039",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27096,
            "identifier": "DB01159",
            "identifier_type": "str",
            "name": "Halothane",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01159",
                "inchi": "InChI=1S/C2HBrClF3/c3-1(4)2(5,6)7/h1H",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BCQZXOMGPXTTIC-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 27097,
            "identifier": "GO:0007369",
            "identifier_type": "str",
            "name": "gastrulation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007369",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27098,
            "identifier": "1801",
            "identifier_type": "int",
            "name": "DPH1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1801",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "diphthamide biosynthesis 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 27099,
            "identifier": "55620",
            "identifier_type": "int",
            "name": "STAP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55620",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "signal transducing adaptor family member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 27100,
            "identifier": "GO:0052422",
            "identifier_type": "str",
            "name": "modulation by host of symbiont catalytic activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052422",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27101,
            "identifier": "GO:0016101",
            "identifier_type": "str",
            "name": "diterpenoid metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016101",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27102,
            "identifier": "GO:0030899",
            "identifier_type": "str",
            "name": "calcium-dependent ATPase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030899",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 27103,
            "identifier": "79025",
            "identifier_type": "int",
            "name": "C20orf195",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79025",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "chromosome 20 open reading frame 195"
            },
            "metanode": "Gene"
        },
        {
            "id": 27104,
            "identifier": "644844",
            "identifier_type": "int",
            "name": "PHGR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/644844",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "proline/histidine/glycine-rich 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 27139,
            "identifier": "GO:0006221",
            "identifier_type": "str",
            "name": "pyrimidine nucleotide biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006221",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27105,
            "identifier": "DB08993",
            "identifier_type": "str",
            "name": "Enviomycin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB08993",
                "inchi": "InChI=1S/C25H43N13O10/c26-3-1-16(41)10(27)5-17(42)33-12-6-31-23(47)18(11-2-4-30-24(28)37-11)38-20(44)13(7-32-25(29)48)34-21(45)14(8-39)36-22(46)15(9-40)35-19(12)43/h7,10-12,14-16,18,39-41H,1-6,8-9,26-27H2,(H,31,47)(H,33,42)(H,34,45)(H,35,43)(H,36,46)(H,38,44)(H3,28,30,37)(H3,29,32,48)/b13-7-/t10-,11-,12+,14+,15+,16-,18+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=HPWIIERXAFODPP-GHBBWTPBSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 27106,
            "identifier": "174",
            "identifier_type": "int",
            "name": "AFP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/174",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "alpha-fetoprotein"
            },
            "metanode": "Gene"
        },
        {
            "id": 27107,
            "identifier": "GO:0003810",
            "identifier_type": "str",
            "name": "protein-glutamine gamma-glutamyltransferase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0003810",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 27108,
            "identifier": "81622",
            "identifier_type": "int",
            "name": "UNC93B1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81622",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "unc-93 homolog B1 (C. elegans)"
            },
            "metanode": "Gene"
        },
        {
            "id": 27109,
            "identifier": "GO:0048678",
            "identifier_type": "str",
            "name": "response to axon injury",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048678",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27110,
            "identifier": "23259",
            "identifier_type": "int",
            "name": "DDHD2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23259",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "DDHD domain containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 27111,
            "identifier": "C0085642",
            "identifier_type": "str",
            "name": "Livedo reticularis",
            "properties": {
                "url": "http://identifiers.org/umls/C0085642",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27112,
            "identifier": "164127",
            "identifier_type": "int",
            "name": "CCDC185",
            "properties": {
                "url": "http://identifiers.org/ncbigene/164127",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "coiled-coil domain containing 185"
            },
            "metanode": "Gene"
        },
        {
            "id": 27113,
            "identifier": "GO:0045924",
            "identifier_type": "str",
            "name": "regulation of female receptivity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045924",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27114,
            "identifier": "79979",
            "identifier_type": "int",
            "name": "TRMT2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79979",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "tRNA methyltransferase 2 homolog B (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 27115,
            "identifier": "PC7_6443",
            "identifier_type": "str",
            "name": "Phenylalanine and tyrosine catabolism",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        }
    ]
}