Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=27350

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=27375",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=27325",
    "results": [
        {
            "id": 27341,
            "identifier": "27042",
            "identifier_type": "int",
            "name": "DIEXF",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27042",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "digestive organ expansion factor homolog (zebrafish)"
            },
            "metanode": "Gene"
        },
        {
            "id": 27342,
            "identifier": "3037",
            "identifier_type": "int",
            "name": "HAS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3037",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "hyaluronan synthase 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 27343,
            "identifier": "92106",
            "identifier_type": "int",
            "name": "OXNAD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/92106",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "oxidoreductase NAD-binding domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 27344,
            "identifier": "80133",
            "identifier_type": "int",
            "name": "MROH9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80133",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "maestro heat-like repeat family member 9"
            },
            "metanode": "Gene"
        },
        {
            "id": 27345,
            "identifier": "GO:0046912",
            "identifier_type": "str",
            "name": "transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046912",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 27346,
            "identifier": "C1504419",
            "identifier_type": "str",
            "name": "Pelvic haemorrhage",
            "properties": {
                "url": "http://identifiers.org/umls/C1504419",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27347,
            "identifier": "C0750194",
            "identifier_type": "str",
            "name": "Non-sustained ventricular tachycardia",
            "properties": {
                "url": "http://identifiers.org/umls/C0750194",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27348,
            "identifier": "GO:0097240",
            "identifier_type": "str",
            "name": "chromosome attachment to the nuclear envelope",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097240",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27349,
            "identifier": "116224",
            "identifier_type": "int",
            "name": "FAM122A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/116224",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "family with sequence similarity 122A"
            },
            "metanode": "Gene"
        },
        {
            "id": 27350,
            "identifier": "DB06402",
            "identifier_type": "str",
            "name": "Telavancin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06402",
                "inchi": "InChI=1S/C80H106Cl2N11O27P.ClH/c1-7-8-9-10-11-12-13-14-21-85-22-23-87-80(5)32-57(115-37(4)71(80)103)119-70-68(102)67(101)55(34-94)118-79(70)120-69-53-28-41-29-54(69)117-52-20-17-40(27-46(52)82)65(99)63-77(109)91-61(78(110)111)43-30-50(96)44(33-86-35-121(112,113)114)66(100)58(43)42-25-38(15-18-49(42)95)59(74(106)93-63)90-75(107)60(41)89-73(105)48(31-56(83)97)88-76(108)62(92-72(104)47(84-6)24-36(2)3)64(98)39-16-19-51(116-53)45(81)26-39;/h15-20,25-30,36-37,47-48,55,57,59-65,67-68,70-71,79,84-87,94-96,98-103H,7-14,21-24,31-35H2,1-6H3,(H2,83,97)(H,88,108)(H,89,105)(H,90,107)(H,91,109)(H,92,104)(H,93,106)(H,110,111)(H2,112,113,114);1H/t37-,47+,48-,55+,57-,59+,60+,61-,62+,63-,64+,65+,67+,68-,70+,71+,79-,80-;/m0./s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GSSIWSIRBWAZHG-ACOPVEIWSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 27351,
            "identifier": "C0238311",
            "identifier_type": "str",
            "name": "Nicotine poisoning",
            "properties": {
                "url": "http://identifiers.org/umls/C0238311",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27352,
            "identifier": "23329",
            "identifier_type": "int",
            "name": "TBC1D30",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23329",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "TBC1 domain family, member 30"
            },
            "metanode": "Gene"
        },
        {
            "id": 27355,
            "identifier": "GO:0008853",
            "identifier_type": "str",
            "name": "exodeoxyribonuclease III activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008853",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 27356,
            "identifier": "GO:0051957",
            "identifier_type": "str",
            "name": "positive regulation of amino acid transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051957",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27357,
            "identifier": "929",
            "identifier_type": "int",
            "name": "CD14",
            "properties": {
                "url": "http://identifiers.org/ncbigene/929",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "CD14 molecule"
            },
            "metanode": "Gene"
        },
        {
            "id": 27358,
            "identifier": "C0079027",
            "identifier_type": "str",
            "name": "Intraoperative hemorrhage",
            "properties": {
                "url": "http://identifiers.org/umls/C0079027",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27359,
            "identifier": "79759",
            "identifier_type": "int",
            "name": "ZNF668",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79759",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "zinc finger protein 668"
            },
            "metanode": "Gene"
        },
        {
            "id": 27360,
            "identifier": "C2711248",
            "identifier_type": "str",
            "name": "Osteonecrosis of jaw",
            "properties": {
                "url": "http://identifiers.org/umls/C2711248",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27361,
            "identifier": "GO:0034678",
            "identifier_type": "str",
            "name": "integrin alpha8-beta1 complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034678",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 27362,
            "identifier": "GO:0034032",
            "identifier_type": "str",
            "name": "purine nucleoside bisphosphate metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034032",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27363,
            "identifier": "9527",
            "identifier_type": "int",
            "name": "GOSR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9527",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "golgi SNAP receptor complex member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 27364,
            "identifier": "51042",
            "identifier_type": "int",
            "name": "ZNF593",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51042",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "zinc finger protein 593"
            },
            "metanode": "Gene"
        },
        {
            "id": 27365,
            "identifier": "GO:0072676",
            "identifier_type": "str",
            "name": "lymphocyte migration",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072676",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27366,
            "identifier": "340260",
            "identifier_type": "int",
            "name": "UNCX",
            "properties": {
                "url": "http://identifiers.org/ncbigene/340260",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "UNC homeobox"
            },
            "metanode": "Gene"
        },
        {
            "id": 27367,
            "identifier": "105378954",
            "identifier_type": "int",
            "name": "LOC105378954",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105378954",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "uncharacterized LOC105378954"
            },
            "metanode": "Gene"
        }
    ]
}