Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=27400
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=27425", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=27375", "results": [ { "id": 27393, "identifier": "105379534", "identifier_type": "int", "name": "LOC105379534", "properties": { "url": "http://identifiers.org/ncbigene/105379534", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "proline-rich receptor-like protein kinase PERK2" }, "metanode": "Gene" }, { "id": 27394, "identifier": "C0022638", "identifier_type": "str", "name": "Ketosis", "properties": { "url": "http://identifiers.org/umls/C0022638", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 27395, "identifier": "DB09003", "identifier_type": "str", "name": "Clocapramine", "properties": { "url": "http://www.drugbank.ca/drugs/DB09003", "inchi": "InChI=1S/C28H37ClN4O/c29-24-12-11-23-10-9-22-7-2-3-8-25(22)33(26(23)21-24)18-6-15-31-19-13-28(14-20-31,27(30)34)32-16-4-1-5-17-32/h2-3,7-8,11-12,21H,1,4-6,9-10,13-20H2,(H2,30,34)", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=QAZKXHSIKKNOHH-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 27396, "identifier": "3925", "identifier_type": "int", "name": "STMN1", "properties": { "url": "http://identifiers.org/ncbigene/3925", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "stathmin 1" }, "metanode": "Gene" }, { "id": 27397, "identifier": "8320", "identifier_type": "int", "name": "EOMES", "properties": { "url": "http://identifiers.org/ncbigene/8320", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "eomesodermin" }, "metanode": "Gene" }, { "id": 27398, "identifier": "GO:0002358", "identifier_type": "str", "name": "B cell homeostatic proliferation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002358", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 27399, "identifier": "DB00810", "identifier_type": "str", "name": "Biperiden", "properties": { "url": "http://www.drugbank.ca/drugs/DB00810", "inchi": "InChI=1S/C21H29NO/c23-21(19-7-3-1-4-8-19,11-14-22-12-5-2-6-13-22)20-16-17-9-10-18(20)15-17/h1,3-4,7-10,17-18,20,23H,2,5-6,11-16H2", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=YSXKPIUOCJLQIE-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 27400, "identifier": "GO:0043197", "identifier_type": "str", "name": "dendritic spine", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043197", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 27401, "identifier": "GO:0046899", "identifier_type": "str", "name": "nucleoside triphosphate adenylate kinase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046899", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 27402, "identifier": "11107", "identifier_type": "int", "name": "PRDM5", "properties": { "url": "http://identifiers.org/ncbigene/11107", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "PR domain containing 5" }, "metanode": "Gene" }, { "id": 27403, "identifier": "100653133", "identifier_type": "int", "name": "LOC100653133", "properties": { "url": "http://identifiers.org/ncbigene/100653133", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "golgin subfamily A member 6-like protein 1" }, "metanode": "Gene" }, { "id": 27404, "identifier": "GO:0035630", "identifier_type": "str", "name": "bone mineralization involved in bone maturation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035630", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 27405, "identifier": "WP2332_r79525", "identifier_type": "str", "name": "Interleukin-11 Signaling Pathway", "properties": { "url": "http://www.wikipathways.org/instance/WP2332_r79525", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 27406, "identifier": "GO:0010982", "identifier_type": "str", "name": "regulation of high-density lipoprotein particle clearance", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010982", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 27407, "identifier": "7076", "identifier_type": "int", "name": "TIMP1", "properties": { "url": "http://identifiers.org/ncbigene/7076", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "TIMP metallopeptidase inhibitor 1" }, "metanode": "Gene" }, { "id": 27408, "identifier": "GO:0019521", "identifier_type": "str", "name": "D-gluconate metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019521", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 27409, "identifier": "340654", "identifier_type": "int", "name": "LIPM", "properties": { "url": "http://identifiers.org/ncbigene/340654", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "lipase, family member M" }, "metanode": "Gene" }, { "id": 27410, "identifier": "1908", "identifier_type": "int", "name": "EDN3", "properties": { "url": "http://identifiers.org/ncbigene/1908", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "endothelin 3" }, "metanode": "Gene" }, { "id": 27411, "identifier": "55471", "identifier_type": "int", "name": "NDUFAF7", "properties": { "url": "http://identifiers.org/ncbigene/55471", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "NADH dehydrogenase (ubiquinone) complex I, assembly factor 7" }, "metanode": "Gene" }, { "id": 27412, "identifier": "64218", "identifier_type": "int", "name": "SEMA4A", "properties": { "url": "http://identifiers.org/ncbigene/64218", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A" }, "metanode": "Gene" }, { "id": 27413, "identifier": "C0036974", "identifier_type": "str", "name": "Shock", "properties": { "url": "http://identifiers.org/umls/C0036974", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 27414, "identifier": "79004", "identifier_type": "int", "name": "CUEDC2", "properties": { "url": "http://identifiers.org/ncbigene/79004", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "CUE domain containing 2" }, "metanode": "Gene" }, { "id": 27415, "identifier": "124930", "identifier_type": "int", "name": "ANKRD13B", "properties": { "url": "http://identifiers.org/ncbigene/124930", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "ankyrin repeat domain 13B" }, "metanode": "Gene" }, { "id": 27416, "identifier": "8900", "identifier_type": "int", "name": "CCNA1", "properties": { "url": "http://identifiers.org/ncbigene/8900", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "cyclin A1" }, "metanode": "Gene" }, { "id": 27417, "identifier": "GO:0003841", "identifier_type": "str", "name": "1-acylglycerol-3-phosphate O-acyltransferase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0003841", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" } ] }