Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=27450

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=27475",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=27425",
    "results": [
        {
            "id": 27442,
            "identifier": "DB01339",
            "identifier_type": "str",
            "name": "Vecuronium",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01339",
                "inchi": "InChI=1S/C34H57N2O4/c1-23(37)39-31-20-25-12-13-26-27(34(25,4)22-29(31)35-16-8-6-9-17-35)14-15-33(3)28(26)21-30(32(33)40-24(2)38)36(5)18-10-7-11-19-36/h25-32H,6-22H2,1-5H3/q+1/t25-,26+,27-,28-,29-,30-,31-,32-,33-,34-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BGSZAXLLHYERSY-XQIGCQGXSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 27443,
            "identifier": "GO:0016881",
            "identifier_type": "str",
            "name": "acid-amino acid ligase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016881",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 27444,
            "identifier": "C0343263",
            "identifier_type": "str",
            "name": "Chondrolysis",
            "properties": {
                "url": "http://identifiers.org/umls/C0343263",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27445,
            "identifier": "3170",
            "identifier_type": "int",
            "name": "FOXA2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3170",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "forkhead box A2"
            },
            "metanode": "Gene"
        },
        {
            "id": 27446,
            "identifier": "GO:0007269",
            "identifier_type": "str",
            "name": "neurotransmitter secretion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007269",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27447,
            "identifier": "GO:0042421",
            "identifier_type": "str",
            "name": "norepinephrine biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042421",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27448,
            "identifier": "GO:0098910",
            "identifier_type": "str",
            "name": "regulation of atrial cardiac muscle cell action potential",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0098910",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27449,
            "identifier": "5511",
            "identifier_type": "int",
            "name": "PPP1R8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5511",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "protein phosphatase 1, regulatory subunit 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 27450,
            "identifier": "GO:0006432",
            "identifier_type": "str",
            "name": "phenylalanyl-tRNA aminoacylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006432",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27451,
            "identifier": "23478",
            "identifier_type": "int",
            "name": "SEC11A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23478",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "SEC11 homolog A (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 27452,
            "identifier": "GO:1904746",
            "identifier_type": "str",
            "name": "negative regulation of apoptotic process involved in development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904746",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27453,
            "identifier": "84446",
            "identifier_type": "int",
            "name": "BRSK1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84446",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "BR serine/threonine kinase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 27454,
            "identifier": "245802",
            "identifier_type": "int",
            "name": "MS4A6E",
            "properties": {
                "url": "http://identifiers.org/ncbigene/245802",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "membrane-spanning 4-domains, subfamily A, member 6E"
            },
            "metanode": "Gene"
        },
        {
            "id": 27455,
            "identifier": "C0028841",
            "identifier_type": "str",
            "name": "Hypotony of eye",
            "properties": {
                "url": "http://identifiers.org/umls/C0028841",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27456,
            "identifier": "C0016033",
            "identifier_type": "str",
            "name": "Fibrocystic disease",
            "properties": {
                "url": "http://identifiers.org/umls/C0016033",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27457,
            "identifier": "C0022541",
            "identifier_type": "str",
            "name": "Kearns-Sayre syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C0022541",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27458,
            "identifier": "WP437_r79266",
            "identifier_type": "str",
            "name": "EGF/EGFR Signaling Pathway",
            "properties": {
                "url": "http://www.wikipathways.org/instance/WP437_r79266",
                "source": "WikiPathways",
                "license": "CC BY 3.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 27459,
            "identifier": "102724782",
            "identifier_type": "int",
            "name": "LOC102724782",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724782",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "uncharacterized LOC102724782"
            },
            "metanode": "Gene"
        },
        {
            "id": 27460,
            "identifier": "GO:0050868",
            "identifier_type": "str",
            "name": "negative regulation of T cell activation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0050868",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 27461,
            "identifier": "C1306600",
            "identifier_type": "str",
            "name": "Radial nerve palsy",
            "properties": {
                "url": "http://identifiers.org/umls/C1306600",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 27462,
            "identifier": "GO:0008250",
            "identifier_type": "str",
            "name": "oligosaccharyltransferase complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008250",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 27463,
            "identifier": "1025",
            "identifier_type": "int",
            "name": "CDK9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1025",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "cyclin-dependent kinase 9"
            },
            "metanode": "Gene"
        },
        {
            "id": 27464,
            "identifier": "140732",
            "identifier_type": "int",
            "name": "SUN5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/140732",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "Sad1 and UNC84 domain containing 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 27465,
            "identifier": "51191",
            "identifier_type": "int",
            "name": "HERC5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51191",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "HECT and RLD domain containing E3 ubiquitin protein ligase 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 27466,
            "identifier": "DB00234",
            "identifier_type": "str",
            "name": "Reboxetine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00234",
                "inchi": "InChI=1S/C19H23NO3/c1-2-21-16-10-6-7-11-17(16)23-19(15-8-4-3-5-9-15)18-14-20-12-13-22-18/h3-11,18-20H,2,12-14H2,1H3/t18-,19-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CBQGYUDMJHNJBX-OALUTQOASA-N"
            },
            "metanode": "Compound"
        }
    ]
}