Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=28150

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=28175",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=28125",
    "results": [
        {
            "id": 28144,
            "identifier": "3872",
            "identifier_type": "int",
            "name": "KRT17",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3872",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "keratin 17, type I"
            },
            "metanode": "Gene"
        },
        {
            "id": 28145,
            "identifier": "8539",
            "identifier_type": "int",
            "name": "API5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8539",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "apoptosis inhibitor 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 28146,
            "identifier": "105371730",
            "identifier_type": "int",
            "name": "LOC105371730",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105371730",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "uncharacterized LOC105371730"
            },
            "metanode": "Gene"
        },
        {
            "id": 28147,
            "identifier": "727837",
            "identifier_type": "int",
            "name": "SSX2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/727837",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "synovial sarcoma, X breakpoint 2B"
            },
            "metanode": "Gene"
        },
        {
            "id": 28148,
            "identifier": "DB05294",
            "identifier_type": "str",
            "name": "Vandetanib",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB05294",
                "inchi": "InChI=1S/C22H24BrFN4O2/c1-28-7-5-14(6-8-28)12-30-21-11-19-16(10-20(21)29-2)22(26-13-25-19)27-18-4-3-15(23)9-17(18)24/h3-4,9-11,13-14H,5-8,12H2,1-2H3,(H,25,26,27)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=UHTHHESEBZOYNR-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 28149,
            "identifier": "10992",
            "identifier_type": "int",
            "name": "SF3B2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10992",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "splicing factor 3b, subunit 2, 145kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 28150,
            "identifier": "GO:0016645",
            "identifier_type": "str",
            "name": "oxidoreductase activity, acting on the CH-NH group of donors",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016645",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 28151,
            "identifier": "C1142257",
            "identifier_type": "str",
            "name": "Incision site pain",
            "properties": {
                "url": "http://identifiers.org/umls/C1142257",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 28152,
            "identifier": "GO:0048251",
            "identifier_type": "str",
            "name": "elastic fiber assembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048251",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28153,
            "identifier": "GO:0048385",
            "identifier_type": "str",
            "name": "regulation of retinoic acid receptor signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048385",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28154,
            "identifier": "GO:0032825",
            "identifier_type": "str",
            "name": "positive regulation of natural killer cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032825",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28155,
            "identifier": "4826",
            "identifier_type": "int",
            "name": "NNAT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4826",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "neuronatin"
            },
            "metanode": "Gene"
        },
        {
            "id": 28156,
            "identifier": "54848",
            "identifier_type": "int",
            "name": "ARHGEF38",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54848",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "Rho guanine nucleotide exchange factor (GEF) 38"
            },
            "metanode": "Gene"
        },
        {
            "id": 28157,
            "identifier": "DB00185",
            "identifier_type": "str",
            "name": "Cevimeline",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00185",
                "inchi": "InChI=1S/C10H17NOS/c1-8-12-10(7-13-8)6-11-4-2-9(10)3-5-11/h8-9H,2-7H2,1H3/t8?,10-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=WUTYZMFRCNBCHQ-LHIURRSHSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 28158,
            "identifier": "GO:0071011",
            "identifier_type": "str",
            "name": "precatalytic spliceosome",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071011",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 28159,
            "identifier": "729533",
            "identifier_type": "int",
            "name": "FAM72A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/729533",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "family with sequence similarity 72, member A"
            },
            "metanode": "Gene"
        },
        {
            "id": 28160,
            "identifier": "7295",
            "identifier_type": "int",
            "name": "TXN",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7295",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "thioredoxin"
            },
            "metanode": "Gene"
        },
        {
            "id": 28161,
            "identifier": "GO:0031570",
            "identifier_type": "str",
            "name": "DNA integrity checkpoint",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0031570",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28162,
            "identifier": "DOID:2994",
            "identifier_type": "str",
            "name": "germ cell cancer",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/DOID_2994",
                "source": "Disease Ontology",
                "license": "CC BY 3.0"
            },
            "metanode": "Disease"
        },
        {
            "id": 28163,
            "identifier": "GO:0097031",
            "identifier_type": "str",
            "name": "mitochondrial respiratory chain complex I biogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097031",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28164,
            "identifier": "GO:0010641",
            "identifier_type": "str",
            "name": "positive regulation of platelet-derived growth factor receptor signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010641",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28165,
            "identifier": "1999",
            "identifier_type": "int",
            "name": "ELF3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1999",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "E74-like factor 3 (ets domain transcription factor, epithelial-specific )"
            },
            "metanode": "Gene"
        },
        {
            "id": 28166,
            "identifier": "57161",
            "identifier_type": "int",
            "name": "PELI2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57161",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "pellino E3 ubiquitin protein ligase family member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 28167,
            "identifier": "GO:0010988",
            "identifier_type": "str",
            "name": "regulation of low-density lipoprotein particle clearance",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010988",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28168,
            "identifier": "1773",
            "identifier_type": "int",
            "name": "DNASE1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1773",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "deoxyribonuclease I"
            },
            "metanode": "Gene"
        }
    ]
}