Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=28350

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=28375",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=28325",
    "results": [
        {
            "id": 28344,
            "identifier": "PC7_1559",
            "identifier_type": "str",
            "name": "Acyl chain remodelling of PE",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 28345,
            "identifier": "GO:0048752",
            "identifier_type": "str",
            "name": "semicircular canal morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048752",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28346,
            "identifier": "3718",
            "identifier_type": "int",
            "name": "JAK3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3718",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "Janus kinase 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 28347,
            "identifier": "8241",
            "identifier_type": "int",
            "name": "RBM10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8241",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "RNA binding motif protein 10"
            },
            "metanode": "Gene"
        },
        {
            "id": 28348,
            "identifier": "C0175754",
            "identifier_type": "str",
            "name": "Corpus callosum agenesis",
            "properties": {
                "url": "http://identifiers.org/umls/C0175754",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 28349,
            "identifier": "10838",
            "identifier_type": "int",
            "name": "ZNF275",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10838",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "zinc finger protein 275"
            },
            "metanode": "Gene"
        },
        {
            "id": 28350,
            "identifier": "353288",
            "identifier_type": "int",
            "name": "KRT26",
            "properties": {
                "url": "http://identifiers.org/ncbigene/353288",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "keratin 26, type I"
            },
            "metanode": "Gene"
        },
        {
            "id": 28351,
            "identifier": "286410",
            "identifier_type": "int",
            "name": "ATP11C",
            "properties": {
                "url": "http://identifiers.org/ncbigene/286410",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "ATPase, class VI, type 11C"
            },
            "metanode": "Gene"
        },
        {
            "id": 28352,
            "identifier": "4528",
            "identifier_type": "int",
            "name": "MTIF2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4528",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "mitochondrial translational initiation factor 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 28353,
            "identifier": "144363",
            "identifier_type": "int",
            "name": "LYRM5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/144363",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "LYR motif containing 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 28354,
            "identifier": "54566",
            "identifier_type": "int",
            "name": "EPB41L4B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54566",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "erythrocyte membrane protein band 4.1 like 4B"
            },
            "metanode": "Gene"
        },
        {
            "id": 28355,
            "identifier": "C0028734",
            "identifier_type": "str",
            "name": "Nocturia",
            "properties": {
                "url": "http://identifiers.org/umls/C0028734",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 28356,
            "identifier": "PC7_3845",
            "identifier_type": "str",
            "name": "FMO oxidises nucleophiles",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 28357,
            "identifier": "7125",
            "identifier_type": "int",
            "name": "TNNC2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7125",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "troponin C type 2 (fast)"
            },
            "metanode": "Gene"
        },
        {
            "id": 28358,
            "identifier": "57019",
            "identifier_type": "int",
            "name": "CIAPIN1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57019",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "cytokine induced apoptosis inhibitor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 28359,
            "identifier": "105377310",
            "identifier_type": "int",
            "name": "LOC105377310",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105377310",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "syncytin-1-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 28360,
            "identifier": "GO:1904747",
            "identifier_type": "str",
            "name": "positive regulation of apoptotic process involved in development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904747",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28361,
            "identifier": "PC7_4947",
            "identifier_type": "str",
            "name": "Laminin interactions",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 28362,
            "identifier": "25962",
            "identifier_type": "int",
            "name": "KIAA1429",
            "properties": {
                "url": "http://identifiers.org/ncbigene/25962",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "KIAA1429"
            },
            "metanode": "Gene"
        },
        {
            "id": 28363,
            "identifier": "GO:0000790",
            "identifier_type": "str",
            "name": "nuclear chromatin",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000790",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 28364,
            "identifier": "DB00288",
            "identifier_type": "str",
            "name": "Amcinonide",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00288",
                "inchi": "InChI=1S/C28H35FO7/c1-16(30)34-15-22(33)28-23(35-26(36-28)9-4-5-10-26)13-20-19-7-6-17-12-18(31)8-11-24(17,2)27(19,29)21(32)14-25(20,28)3/h8,11-12,19-21,23,32H,4-7,9-10,13-15H2,1-3H3/t19-,20-,21-,23+,24-,25-,27-,28+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ILKJAFIWWBXGDU-MOGDOJJUSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 28365,
            "identifier": "220972",
            "identifier_type": "int",
            "name": "MARCH8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/220972",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase"
            },
            "metanode": "Gene"
        },
        {
            "id": 28366,
            "identifier": "79053",
            "identifier_type": "int",
            "name": "ALG8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79053",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "ALG8, alpha-1,3-glucosyltransferase"
            },
            "metanode": "Gene"
        },
        {
            "id": 28367,
            "identifier": "GO:0061101",
            "identifier_type": "str",
            "name": "neuroendocrine cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061101",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 28368,
            "identifier": "GO:0045806",
            "identifier_type": "str",
            "name": "negative regulation of endocytosis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045806",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}