Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=28375
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=28400", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=28350", "results": [ { "id": 28369, "identifier": "58", "identifier_type": "int", "name": "ACTA1", "properties": { "url": "http://identifiers.org/ncbigene/58", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "actin, alpha 1, skeletal muscle" }, "metanode": "Gene" }, { "id": 28370, "identifier": "8821", "identifier_type": "int", "name": "INPP4B", "properties": { "url": "http://identifiers.org/ncbigene/8821", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "inositol polyphosphate-4-phosphatase, type II, 105kDa" }, "metanode": "Gene" }, { "id": 28371, "identifier": "GO:0050906", "identifier_type": "str", "name": "detection of stimulus involved in sensory perception", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0050906", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 28372, "identifier": "C0239302", "identifier_type": "str", "name": "Oestrogen low", "properties": { "url": "http://identifiers.org/umls/C0239302", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 28373, "identifier": "DB08897", "identifier_type": "str", "name": "Aclidinium", "properties": { "url": "http://www.drugbank.ca/drugs/DB08897", "inchi": "InChI=1S/C26H30NO4S2/c28-25(26(29,23-9-4-17-32-23)24-10-5-18-33-24)31-22-19-27(14-11-20(22)12-15-27)13-6-16-30-21-7-2-1-3-8-21/h1-5,7-10,17-18,20,22,29H,6,11-16,19H2/q+1/t20?,22-,27?/m0/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=ASMXXROZKSBQIH-VITNCHFBSA-N" }, "metanode": "Compound" }, { "id": 28374, "identifier": "149233", "identifier_type": "int", "name": "IL23R", "properties": { "url": "http://identifiers.org/ncbigene/149233", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "interleukin 23 receptor" }, "metanode": "Gene" }, { "id": 28375, "identifier": "11146", "identifier_type": "int", "name": "GLMN", "properties": { "url": "http://identifiers.org/ncbigene/11146", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "glomulin, FKBP associated protein" }, "metanode": "Gene" }, { "id": 28376, "identifier": "PC7_2568", "identifier_type": "str", "name": "Chondroitin sulfate biosynthesis", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 28377, "identifier": "645426", "identifier_type": "int", "name": "TMEM191C", "properties": { "url": "http://identifiers.org/ncbigene/645426", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "transmembrane protein 191C" }, "metanode": "Gene" }, { "id": 28378, "identifier": "29113", "identifier_type": "int", "name": "C6orf15", "properties": { "url": "http://identifiers.org/ncbigene/29113", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "chromosome 6 open reading frame 15" }, "metanode": "Gene" }, { "id": 28379, "identifier": "5108", "identifier_type": "int", "name": "PCM1", "properties": { "url": "http://identifiers.org/ncbigene/5108", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "pericentriolar material 1" }, "metanode": "Gene" }, { "id": 28380, "identifier": "55130", "identifier_type": "int", "name": "ARMC4", "properties": { "url": "http://identifiers.org/ncbigene/55130", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "armadillo repeat containing 4" }, "metanode": "Gene" }, { "id": 28381, "identifier": "102723553", "identifier_type": "int", "name": "LOC102723553", "properties": { "url": "http://identifiers.org/ncbigene/102723553", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "21", "description": "uncharacterized LOC102723553" }, "metanode": "Gene" }, { "id": 28382, "identifier": "112744", "identifier_type": "int", "name": "IL17F", "properties": { "url": "http://identifiers.org/ncbigene/112744", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "interleukin 17F" }, "metanode": "Gene" }, { "id": 28383, "identifier": "7433", "identifier_type": "int", "name": "VIPR1", "properties": { "url": "http://identifiers.org/ncbigene/7433", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "vasoactive intestinal peptide receptor 1" }, "metanode": "Gene" }, { "id": 28384, "identifier": "WP428_r79854", "identifier_type": "str", "name": "Wnt Signaling Pathway", "properties": { "url": "http://www.wikipathways.org/instance/WP428_r79854", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 28385, "identifier": "90321", "identifier_type": "int", "name": "ZNF766", "properties": { "url": "http://identifiers.org/ncbigene/90321", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 766" }, "metanode": "Gene" }, { "id": 28386, "identifier": "PC7_3071", "identifier_type": "str", "name": "Depolarization of the Presynaptic Terminal Triggers the Opening of Calcium Channels", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 28387, "identifier": "C0019559", "identifier_type": "str", "name": "Coxalgia", "properties": { "url": "http://identifiers.org/umls/C0019559", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 28388, "identifier": "D006319", "identifier_type": "str", "name": "Hearing Loss, Sensorineural", "properties": { "url": "http://identifiers.org/mesh/D006319", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 28389, "identifier": "100287859", "identifier_type": "int", "name": "FAM197Y6", "properties": { "url": "http://identifiers.org/ncbigene/100287859", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "Y", "description": "family with sequence similarity 197, Y-linked, member 6" }, "metanode": "Gene" }, { "id": 28390, "identifier": "26286", "identifier_type": "int", "name": "ARFGAP3", "properties": { "url": "http://identifiers.org/ncbigene/26286", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "ADP-ribosylation factor GTPase activating protein 3" }, "metanode": "Gene" }, { "id": 28391, "identifier": "64591", "identifier_type": "int", "name": "TSPY2", "properties": { "url": "http://identifiers.org/ncbigene/64591", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "Y", "description": "testis specific protein, Y-linked 2" }, "metanode": "Gene" }, { "id": 28392, "identifier": "GO:1990904", "identifier_type": "str", "name": "ribonucleoprotein complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1990904", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 28393, "identifier": "GO:0031210", "identifier_type": "str", "name": "phosphatidylcholine binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031210", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" } ] }