Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=28750
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=28775", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=28725", "results": [ { "id": 28743, "identifier": "925", "identifier_type": "int", "name": "CD8A", "properties": { "url": "http://identifiers.org/ncbigene/925", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "CD8a molecule" }, "metanode": "Gene" }, { "id": 28744, "identifier": "9672", "identifier_type": "int", "name": "SDC3", "properties": { "url": "http://identifiers.org/ncbigene/9672", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "syndecan 3" }, "metanode": "Gene" }, { "id": 28745, "identifier": "GO:0016728", "identifier_type": "str", "name": "oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016728", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 28746, "identifier": "GO:1901509", "identifier_type": "str", "name": "regulation of endothelial tube morphogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1901509", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 28747, "identifier": "DB08889", "identifier_type": "str", "name": "Carfilzomib", "properties": { "url": "http://www.drugbank.ca/drugs/DB08889", "inchi": "InChI=1S/C40H57N5O7/c1-27(2)22-32(36(47)40(5)26-52-40)42-39(50)34(24-30-14-10-7-11-15-30)44-38(49)33(23-28(3)4)43-37(48)31(17-16-29-12-8-6-9-13-29)41-35(46)25-45-18-20-51-21-19-45/h6-15,27-28,31-34H,16-26H2,1-5H3,(H,41,46)(H,42,50)(H,43,48)(H,44,49)/t31-,32-,33-,34-,40+/m0/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=BLMPQMFVWMYDKT-NZTKNTHTSA-N" }, "metanode": "Compound" }, { "id": 28748, "identifier": "GO:0031435", "identifier_type": "str", "name": "mitogen-activated protein kinase kinase kinase binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031435", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 28749, "identifier": "84915", "identifier_type": "int", "name": "FAM222A", "properties": { "url": "http://identifiers.org/ncbigene/84915", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "family with sequence similarity 222, member A" }, "metanode": "Gene" }, { "id": 28750, "identifier": "GO:0033540", "identifier_type": "str", "name": "fatty acid beta-oxidation using acyl-CoA oxidase", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033540", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 28751, "identifier": "GO:0008305", "identifier_type": "str", "name": "integrin complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0008305", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 28752, "identifier": "GO:1902990", "identifier_type": "str", "name": "mitotic telomere maintenance via semi-conservative replication", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902990", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 28753, "identifier": "130752", "identifier_type": "int", "name": "MDH1B", "properties": { "url": "http://identifiers.org/ncbigene/130752", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "malate dehydrogenase 1B, NAD (soluble)" }, "metanode": "Gene" }, { "id": 28754, "identifier": "PC7_7434", "identifier_type": "str", "name": "Sialic acid metabolism", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 28755, "identifier": "29980", "identifier_type": "int", "name": "DONSON", "properties": { "url": "http://identifiers.org/ncbigene/29980", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "21", "description": "downstream neighbor of SON" }, "metanode": "Gene" }, { "id": 28756, "identifier": "GO:1902310", "identifier_type": "str", "name": "positive regulation of peptidyl-serine dephosphorylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902310", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 28757, "identifier": "10370", "identifier_type": "int", "name": "CITED2", "properties": { "url": "http://identifiers.org/ncbigene/10370", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2" }, "metanode": "Gene" }, { "id": 28758, "identifier": "8532", "identifier_type": "int", "name": "CPZ", "properties": { "url": "http://identifiers.org/ncbigene/8532", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "carboxypeptidase Z" }, "metanode": "Gene" }, { "id": 28759, "identifier": "GO:0071664", "identifier_type": "str", "name": "catenin-TCF7L2 complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071664", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 28760, "identifier": "GO:0035966", "identifier_type": "str", "name": "response to topologically incorrect protein", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035966", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 28761, "identifier": "4332", "identifier_type": "int", "name": "MNDA", "properties": { "url": "http://identifiers.org/ncbigene/4332", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "myeloid cell nuclear differentiation antigen" }, "metanode": "Gene" }, { "id": 28762, "identifier": "GO:0008023", "identifier_type": "str", "name": "transcription elongation factor complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0008023", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 28763, "identifier": "84654", "identifier_type": "int", "name": "SPZ1", "properties": { "url": "http://identifiers.org/ncbigene/84654", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "spermatogenic leucine zipper 1" }, "metanode": "Gene" }, { "id": 28764, "identifier": "254773", "identifier_type": "int", "name": "LYG2", "properties": { "url": "http://identifiers.org/ncbigene/254773", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "lysozyme G-like 2" }, "metanode": "Gene" }, { "id": 28765, "identifier": "6657", "identifier_type": "int", "name": "SOX2", "properties": { "url": "http://identifiers.org/ncbigene/6657", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "SRY (sex determining region Y)-box 2" }, "metanode": "Gene" }, { "id": 28766, "identifier": "GO:0070201", "identifier_type": "str", "name": "regulation of establishment of protein localization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070201", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 28767, "identifier": "GO:0007096", "identifier_type": "str", "name": "regulation of exit from mitosis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0007096", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }