Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=29075
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=29100", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=29050", "results": [ { "id": 29068, "identifier": "6184", "identifier_type": "int", "name": "RPN1", "properties": { "url": "http://identifiers.org/ncbigene/6184", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "ribophorin I" }, "metanode": "Gene" }, { "id": 29069, "identifier": "64969", "identifier_type": "int", "name": "MRPS5", "properties": { "url": "http://identifiers.org/ncbigene/64969", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "mitochondrial ribosomal protein S5" }, "metanode": "Gene" }, { "id": 29070, "identifier": "GO:2000562", "identifier_type": "str", "name": "negative regulation of CD4-positive, alpha-beta T cell proliferation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000562", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29071, "identifier": "UBERON:0001773", "identifier_type": "str", "name": "sclera", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0001773", "bto_id": "BTO:0001606", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D012590" }, "metanode": "Anatomy" }, { "id": 29072, "identifier": "79755", "identifier_type": "int", "name": "ZNF750", "properties": { "url": "http://identifiers.org/ncbigene/79755", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "zinc finger protein 750" }, "metanode": "Gene" }, { "id": 29073, "identifier": "GO:2000196", "identifier_type": "str", "name": "positive regulation of female gonad development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000196", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29074, "identifier": "C0700053", "identifier_type": "str", "name": "Idiopathic hypertrophic subaortic stenosis", "properties": { "url": "http://identifiers.org/umls/C0700053", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 29075, "identifier": "GO:0051905", "identifier_type": "str", "name": "establishment of pigment granule localization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051905", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29076, "identifier": "GO:0046292", "identifier_type": "str", "name": "formaldehyde metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046292", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29077, "identifier": "134429", "identifier_type": "int", "name": "STARD4", "properties": { "url": "http://identifiers.org/ncbigene/134429", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "StAR-related lipid transfer (START) domain containing 4" }, "metanode": "Gene" }, { "id": 29078, "identifier": "27333", "identifier_type": "int", "name": "GOLIM4", "properties": { "url": "http://identifiers.org/ncbigene/27333", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "golgi integral membrane protein 4" }, "metanode": "Gene" }, { "id": 29079, "identifier": "83935", "identifier_type": "int", "name": "TMEM133", "properties": { "url": "http://identifiers.org/ncbigene/83935", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "transmembrane protein 133" }, "metanode": "Gene" }, { "id": 29080, "identifier": "80709", "identifier_type": "int", "name": "AKNA", "properties": { "url": "http://identifiers.org/ncbigene/80709", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "AT-hook transcription factor" }, "metanode": "Gene" }, { "id": 29081, "identifier": "PC7_6171", "identifier_type": "str", "name": "PKA activation", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 29082, "identifier": "GO:0046718", "identifier_type": "str", "name": "viral entry into host cell", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046718", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29083, "identifier": "29959", "identifier_type": "int", "name": "NRBP1", "properties": { "url": "http://identifiers.org/ncbigene/29959", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "nuclear receptor binding protein 1" }, "metanode": "Gene" }, { "id": 29084, "identifier": "5810", "identifier_type": "int", "name": "RAD1", "properties": { "url": "http://identifiers.org/ncbigene/5810", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "RAD1 checkpoint DNA exonuclease" }, "metanode": "Gene" }, { "id": 29085, "identifier": "10477", "identifier_type": "int", "name": "UBE2E3", "properties": { "url": "http://identifiers.org/ncbigene/10477", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "ubiquitin-conjugating enzyme E2E 3" }, "metanode": "Gene" }, { "id": 29086, "identifier": "90799", "identifier_type": "int", "name": "CEP95", "properties": { "url": "http://identifiers.org/ncbigene/90799", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "centrosomal protein 95kDa" }, "metanode": "Gene" }, { "id": 29087, "identifier": "GO:1902803", "identifier_type": "str", "name": "regulation of synaptic vesicle transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902803", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29088, "identifier": "4311", "identifier_type": "int", "name": "MME", "properties": { "url": "http://identifiers.org/ncbigene/4311", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "membrane metallo-endopeptidase" }, "metanode": "Gene" }, { "id": 29089, "identifier": "54205", "identifier_type": "int", "name": "CYCS", "properties": { "url": "http://identifiers.org/ncbigene/54205", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "cytochrome c, somatic" }, "metanode": "Gene" }, { "id": 29090, "identifier": "84617", "identifier_type": "int", "name": "TUBB6", "properties": { "url": "http://identifiers.org/ncbigene/84617", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "tubulin, beta 6 class V" }, "metanode": "Gene" }, { "id": 29091, "identifier": "93380", "identifier_type": "int", "name": "MMGT1", "properties": { "url": "http://identifiers.org/ncbigene/93380", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "membrane magnesium transporter 1" }, "metanode": "Gene" }, { "id": 29092, "identifier": "6764", "identifier_type": "int", "name": "ST5", "properties": { "url": "http://identifiers.org/ncbigene/6764", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "suppression of tumorigenicity 5" }, "metanode": "Gene" } ] }