Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=29275

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=29300",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=29250",
    "results": [
        {
            "id": 29268,
            "identifier": "DB00924",
            "identifier_type": "str",
            "name": "Cyclobenzaprine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00924",
                "inchi": "InChI=1S/C20H21N/c1-21(2)15-7-12-20-18-10-5-3-8-16(18)13-14-17-9-4-6-11-19(17)20/h3-6,8-14H,7,15H2,1-2H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JURKNVYFZMSNLP-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 29269,
            "identifier": "GO:0070777",
            "identifier_type": "str",
            "name": "D-aspartate transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070777",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29270,
            "identifier": "GO:0009186",
            "identifier_type": "str",
            "name": "deoxyribonucleoside diphosphate metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009186",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29271,
            "identifier": "10307",
            "identifier_type": "int",
            "name": "APBB3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10307",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "amyloid beta (A4) precursor protein-binding, family B, member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 29272,
            "identifier": "51710",
            "identifier_type": "int",
            "name": "ZNF44",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51710",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 44"
            },
            "metanode": "Gene"
        },
        {
            "id": 29273,
            "identifier": "GO:2000400",
            "identifier_type": "str",
            "name": "positive regulation of thymocyte aggregation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000400",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29274,
            "identifier": "PC7_11234",
            "identifier_type": "str",
            "name": "cell division",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 29275,
            "identifier": "93082",
            "identifier_type": "int",
            "name": "NEURL3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/93082",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "neuralized E3 ubiquitin protein ligase 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 29276,
            "identifier": "6594",
            "identifier_type": "int",
            "name": "SMARCA1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6594",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 29277,
            "identifier": "GO:0033176",
            "identifier_type": "str",
            "name": "proton-transporting V-type ATPase complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0033176",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 29278,
            "identifier": "65251",
            "identifier_type": "int",
            "name": "ZNF649",
            "properties": {
                "url": "http://identifiers.org/ncbigene/65251",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 649"
            },
            "metanode": "Gene"
        },
        {
            "id": 29279,
            "identifier": "C0234428",
            "identifier_type": "str",
            "name": "Consciousness abnormal",
            "properties": {
                "url": "http://identifiers.org/umls/C0234428",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 29280,
            "identifier": "GO:0035162",
            "identifier_type": "str",
            "name": "embryonic hemopoiesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035162",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29281,
            "identifier": "125963",
            "identifier_type": "int",
            "name": "OR1M1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/125963",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "olfactory receptor, family 1, subfamily M, member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 29282,
            "identifier": "DB06711",
            "identifier_type": "str",
            "name": "Naphazoline",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06711",
                "inchi": "InChI=1S/C14H14N2/c1-2-7-13-11(4-1)5-3-6-12(13)10-14-15-8-9-16-14/h1-7H,8-10H2,(H,15,16)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CNIIGCLFLJGOGP-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 29283,
            "identifier": "9933",
            "identifier_type": "int",
            "name": "KIAA0020",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9933",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "KIAA0020"
            },
            "metanode": "Gene"
        },
        {
            "id": 29284,
            "identifier": "C2225524",
            "identifier_type": "str",
            "name": "Breast enlargement",
            "properties": {
                "url": "http://identifiers.org/umls/C2225524",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 29285,
            "identifier": "GO:1903432",
            "identifier_type": "str",
            "name": "regulation of TORC1 signaling",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903432",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29286,
            "identifier": "8290",
            "identifier_type": "int",
            "name": "HIST3H3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8290",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "histone cluster 3, H3"
            },
            "metanode": "Gene"
        },
        {
            "id": 29287,
            "identifier": "UBERON:0001690",
            "identifier_type": "str",
            "name": "ear",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0001690",
                "bto_id": "BTO:0000368",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D004423"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 29288,
            "identifier": "GO:0097021",
            "identifier_type": "str",
            "name": "lymphocyte migration into lymphoid organs",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097021",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29289,
            "identifier": "2124",
            "identifier_type": "int",
            "name": "EVI2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2124",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "ecotropic viral integration site 2B"
            },
            "metanode": "Gene"
        },
        {
            "id": 29290,
            "identifier": "10631",
            "identifier_type": "int",
            "name": "POSTN",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10631",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "periostin, osteoblast specific factor"
            },
            "metanode": "Gene"
        },
        {
            "id": 29291,
            "identifier": "GO:1902530",
            "identifier_type": "str",
            "name": "positive regulation of protein linear polyubiquitination",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902530",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29292,
            "identifier": "DB00866",
            "identifier_type": "str",
            "name": "Alprenolol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00866",
                "inchi": "InChI=1S/C15H23NO2/c1-4-7-13-8-5-6-9-15(13)18-11-14(17)10-16-12(2)3/h4-6,8-9,12,14,16-17H,1,7,10-11H2,2-3H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=PAZJSJFMUHDSTF-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        }
    ]
}