Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=29850

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=29875",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=29825",
    "results": [
        {
            "id": 29844,
            "identifier": "GO:0071674",
            "identifier_type": "str",
            "name": "mononuclear cell migration",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071674",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29845,
            "identifier": "57818",
            "identifier_type": "int",
            "name": "G6PC2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57818",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "glucose-6-phosphatase, catalytic, 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 29846,
            "identifier": "GO:0072079",
            "identifier_type": "str",
            "name": "nephron tubule formation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072079",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29847,
            "identifier": "C0264344",
            "identifier_type": "str",
            "name": "Bronchitis bacterial",
            "properties": {
                "url": "http://identifiers.org/umls/C0264344",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 29848,
            "identifier": "83707",
            "identifier_type": "int",
            "name": "TRPT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/83707",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "tRNA phosphotransferase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 29849,
            "identifier": "GO:1903276",
            "identifier_type": "str",
            "name": "regulation of sodium ion export from cell",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903276",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29850,
            "identifier": "GO:0021754",
            "identifier_type": "str",
            "name": "facial nucleus development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021754",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29851,
            "identifier": "5726",
            "identifier_type": "int",
            "name": "TAS2R38",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5726",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "taste receptor, type 2, member 38"
            },
            "metanode": "Gene"
        },
        {
            "id": 29852,
            "identifier": "51652",
            "identifier_type": "int",
            "name": "CHMP3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51652",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "charged multivesicular body protein 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 29853,
            "identifier": "GO:0051594",
            "identifier_type": "str",
            "name": "detection of glucose",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051594",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29854,
            "identifier": "GO:1900368",
            "identifier_type": "str",
            "name": "regulation of RNA interference",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1900368",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29855,
            "identifier": "100505767",
            "identifier_type": "int",
            "name": "SPDYE18",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100505767",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "speedy/RINGO cell cycle regulator family member E18"
            },
            "metanode": "Gene"
        },
        {
            "id": 29856,
            "identifier": "GO:1990167",
            "identifier_type": "str",
            "name": "protein K27-linked deubiquitination",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1990167",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 29857,
            "identifier": "143662",
            "identifier_type": "int",
            "name": "MUC15",
            "properties": {
                "url": "http://identifiers.org/ncbigene/143662",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "mucin 15, cell surface associated"
            },
            "metanode": "Gene"
        },
        {
            "id": 29858,
            "identifier": "642623",
            "identifier_type": "int",
            "name": "UBTFL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/642623",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "upstream binding transcription factor, RNA polymerase I-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 29859,
            "identifier": "PC7_7797",
            "identifier_type": "str",
            "name": "TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 29860,
            "identifier": "GO:0000977",
            "identifier_type": "str",
            "name": "RNA polymerase II regulatory region sequence-specific DNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000977",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 29861,
            "identifier": "84662",
            "identifier_type": "int",
            "name": "GLIS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84662",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "GLIS family zinc finger 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 29862,
            "identifier": "C0021933",
            "identifier_type": "str",
            "name": "Intussusception",
            "properties": {
                "url": "http://identifiers.org/umls/C0021933",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 29863,
            "identifier": "DB00932",
            "identifier_type": "str",
            "name": "Tipranavir",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00932",
                "inchi": "InChI=1S/C31H33F3N2O5S/c1-3-16-30(17-15-21-9-6-5-7-10-21)19-26(37)28(29(38)41-30)25(4-2)22-11-8-12-24(18-22)36-42(39,40)27-14-13-23(20-35-27)31(32,33)34/h5-14,18,20,25,36,38H,3-4,15-17,19H2,1-2H3/t25-,30-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=NZPXPXAGXYTROM-FYBSXPHGSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 29864,
            "identifier": "65065",
            "identifier_type": "int",
            "name": "NBEAL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/65065",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "neurobeachin-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 29865,
            "identifier": "N0000184145",
            "identifier_type": "str",
            "name": "Chloride Channel Activation Potentiators",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000184145",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Mechanism of Action"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 29866,
            "identifier": "4225",
            "identifier_type": "int",
            "name": "MEP1B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4225",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "meprin A, beta"
            },
            "metanode": "Gene"
        },
        {
            "id": 29867,
            "identifier": "117286",
            "identifier_type": "int",
            "name": "CIB3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/117286",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "calcium and integrin binding family member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 29868,
            "identifier": "105376849",
            "identifier_type": "int",
            "name": "LOC105376849",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105376849",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "basic proline-rich protein-like"
            },
            "metanode": "Gene"
        }
    ]
}