Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=29975
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=30000", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=29950", "results": [ { "id": 29969, "identifier": "PC7_2508", "identifier_type": "str", "name": "Caspase-mediated cleavage of cytoskeletal proteins", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 29970, "identifier": "GO:0033256", "identifier_type": "str", "name": "I-kappaB/NF-kappaB complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033256", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 29971, "identifier": "GO:0034059", "identifier_type": "str", "name": "response to anoxia", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0034059", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29972, "identifier": "1389", "identifier_type": "int", "name": "CREBL2", "properties": { "url": "http://identifiers.org/ncbigene/1389", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "cAMP responsive element binding protein-like 2" }, "metanode": "Gene" }, { "id": 29973, "identifier": "9880", "identifier_type": "int", "name": "ZBTB39", "properties": { "url": "http://identifiers.org/ncbigene/9880", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "zinc finger and BTB domain containing 39" }, "metanode": "Gene" }, { "id": 29974, "identifier": "441273", "identifier_type": "int", "name": "SPDYE2", "properties": { "url": "http://identifiers.org/ncbigene/441273", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "speedy/RINGO cell cycle regulator family member E2" }, "metanode": "Gene" }, { "id": 29975, "identifier": "GO:0002208", "identifier_type": "str", "name": "somatic diversification of immunoglobulins involved in immune response", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002208", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29976, "identifier": "3714", "identifier_type": "int", "name": "JAG2", "properties": { "url": "http://identifiers.org/ncbigene/3714", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "jagged 2" }, "metanode": "Gene" }, { "id": 29977, "identifier": "GO:0010658", "identifier_type": "str", "name": "striated muscle cell apoptotic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010658", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29978, "identifier": "GO:0016623", "identifier_type": "str", "name": "oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016623", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 29979, "identifier": "GO:0031330", "identifier_type": "str", "name": "negative regulation of cellular catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031330", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29980, "identifier": "GO:2000599", "identifier_type": "str", "name": "negative regulation of cyclin catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000599", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29981, "identifier": "C0423798", "identifier_type": "str", "name": "Increased tendency to bruise", "properties": { "url": "http://identifiers.org/umls/C0423798", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 29982, "identifier": "C0340278", "identifier_type": "str", "name": "Atrial hypertrophy", "properties": { "url": "http://identifiers.org/umls/C0340278", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 29983, "identifier": "GO:0071279", "identifier_type": "str", "name": "cellular response to cobalt ion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071279", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29984, "identifier": "N0000008779", "identifier_type": "str", "name": "Decreased Parasympathetic Acetylcholine Activity", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000008779", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Physiologic Effect" }, "metanode": "Pharmacologic Class" }, { "id": 29985, "identifier": "91156", "identifier_type": "int", "name": "IGFN1", "properties": { "url": "http://identifiers.org/ncbigene/91156", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "immunoglobulin-like and fibronectin type III domain containing 1" }, "metanode": "Gene" }, { "id": 29986, "identifier": "100861519", "identifier_type": "int", "name": "GDNF-AS1", "properties": { "url": "http://identifiers.org/ncbigene/100861519", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "GDNF antisense RNA 1 (head to head)" }, "metanode": "Gene" }, { "id": 29987, "identifier": "4540", "identifier_type": "int", "name": "ND5", "properties": { "url": "http://identifiers.org/ncbigene/4540", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "MT", "description": "NADH dehydrogenase, subunit 5 (complex I)" }, "metanode": "Gene" }, { "id": 29988, "identifier": "GO:0042824", "identifier_type": "str", "name": "MHC class I peptide loading complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042824", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 29989, "identifier": "PC7_6909", "identifier_type": "str", "name": "Regulation of insulin secretion", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 29990, "identifier": "GO:0035493", "identifier_type": "str", "name": "SNARE complex assembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035493", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29991, "identifier": "GO:0030260", "identifier_type": "str", "name": "entry into host cell", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030260", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29992, "identifier": "GO:0036258", "identifier_type": "str", "name": "multivesicular body assembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0036258", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 29993, "identifier": "57159", "identifier_type": "int", "name": "TRIM54", "properties": { "url": "http://identifiers.org/ncbigene/57159", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "tripartite motif containing 54" }, "metanode": "Gene" } ] }