Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=31200

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=31225",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=31175",
    "results": [
        {
            "id": 31194,
            "identifier": "GO:0005902",
            "identifier_type": "str",
            "name": "microvillus",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005902",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 31195,
            "identifier": "837",
            "identifier_type": "int",
            "name": "CASP4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/837",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "caspase 4, apoptosis-related cysteine peptidase"
            },
            "metanode": "Gene"
        },
        {
            "id": 31196,
            "identifier": "9456",
            "identifier_type": "int",
            "name": "HOMER1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9456",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "homer scaffolding protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 31197,
            "identifier": "DB01081",
            "identifier_type": "str",
            "name": "Diphenoxylate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01081",
                "inchi": "InChI=1S/C30H32N2O2/c1-2-34-28(33)29(25-12-6-3-7-13-25)18-21-32(22-19-29)23-20-30(24-31,26-14-8-4-9-15-26)27-16-10-5-11-17-27/h3-17H,2,18-23H2,1H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=HYPPXZBJBPSRLK-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 31198,
            "identifier": "GO:0070836",
            "identifier_type": "str",
            "name": "caveola assembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070836",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31199,
            "identifier": "220108",
            "identifier_type": "int",
            "name": "FAM124A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/220108",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "family with sequence similarity 124A"
            },
            "metanode": "Gene"
        },
        {
            "id": 31200,
            "identifier": "340205",
            "identifier_type": "int",
            "name": "TREML1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/340205",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "triggering receptor expressed on myeloid cells-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 31201,
            "identifier": "GO:0090501",
            "identifier_type": "str",
            "name": "RNA phosphodiester bond hydrolysis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090501",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31202,
            "identifier": "GO:2000398",
            "identifier_type": "str",
            "name": "regulation of thymocyte aggregation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000398",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31203,
            "identifier": "3290",
            "identifier_type": "int",
            "name": "HSD11B1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3290",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "hydroxysteroid (11-beta) dehydrogenase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 31204,
            "identifier": "PC7_2395",
            "identifier_type": "str",
            "name": "CaMK IV-mediated phosphorylation of CREB",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 31205,
            "identifier": "PC7_8054",
            "identifier_type": "str",
            "name": "TRAF6 Mediated Induction of proinflammatory cytokines",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 31206,
            "identifier": "DB00406",
            "identifier_type": "str",
            "name": "Gentian Violet",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00406",
                "inchi": "InChI=1S/C25H30N3/c1-26(2)22-13-7-19(8-14-22)25(20-9-15-23(16-10-20)27(3)4)21-11-17-24(18-12-21)28(5)6/h7-18H,1-6H3/q+1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=LGLFFNDHMLKUMI-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 31207,
            "identifier": "GO:0043553",
            "identifier_type": "str",
            "name": "negative regulation of phosphatidylinositol 3-kinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043553",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31208,
            "identifier": "GO:0044557",
            "identifier_type": "str",
            "name": "relaxation of smooth muscle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044557",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31209,
            "identifier": "23598",
            "identifier_type": "int",
            "name": "PATZ1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23598",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "POZ (BTB) and AT hook containing zinc finger 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 31210,
            "identifier": "D065634",
            "identifier_type": "str",
            "name": "Cerebrospinal Fluid Leak",
            "properties": {
                "url": "http://identifiers.org/mesh/D065634",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 31211,
            "identifier": "GO:0006572",
            "identifier_type": "str",
            "name": "tyrosine catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006572",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31212,
            "identifier": "C0343166",
            "identifier_type": "str",
            "name": "Effusion of knee",
            "properties": {
                "url": "http://identifiers.org/umls/C0343166",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31213,
            "identifier": "102723680",
            "identifier_type": "int",
            "name": "CT45A9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102723680",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "cancer/testis antigen family 45, member A9"
            },
            "metanode": "Gene"
        },
        {
            "id": 31214,
            "identifier": "C2004521",
            "identifier_type": "str",
            "name": "Anaemia vitamin B12 deficiency",
            "properties": {
                "url": "http://identifiers.org/umls/C2004521",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31215,
            "identifier": "GO:0048070",
            "identifier_type": "str",
            "name": "regulation of developmental pigmentation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048070",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31216,
            "identifier": "UBERON:0002017",
            "identifier_type": "str",
            "name": "portal vein",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0002017",
                "bto_id": "BTO:0001792",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D011169"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 31217,
            "identifier": "6441",
            "identifier_type": "int",
            "name": "SFTPD",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6441",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "surfactant protein D"
            },
            "metanode": "Gene"
        },
        {
            "id": 31218,
            "identifier": "56479",
            "identifier_type": "int",
            "name": "KCNQ5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56479",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "potassium channel, voltage gated KQT-like subfamily Q, member 5"
            },
            "metanode": "Gene"
        }
    ]
}