Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=31250

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=31275",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=31225",
    "results": [
        {
            "id": 31244,
            "identifier": "GO:0046136",
            "identifier_type": "str",
            "name": "positive regulation of vitamin metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046136",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31245,
            "identifier": "GO:0004137",
            "identifier_type": "str",
            "name": "deoxycytidine kinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004137",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 31246,
            "identifier": "GO:2000910",
            "identifier_type": "str",
            "name": "negative regulation of sterol import",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000910",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31247,
            "identifier": "100130613",
            "identifier_type": "int",
            "name": "PRR32",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100130613",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "proline rich 32"
            },
            "metanode": "Gene"
        },
        {
            "id": 31248,
            "identifier": "284161",
            "identifier_type": "int",
            "name": "GDPD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284161",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "glycerophosphodiester phosphodiesterase domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 31249,
            "identifier": "DB00376",
            "identifier_type": "str",
            "name": "Trihexyphenidyl",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00376",
                "inchi": "InChI=1S/C20H31NO/c22-20(18-10-4-1-5-11-18,19-12-6-2-7-13-19)14-17-21-15-8-3-9-16-21/h1,4-5,10-11,19,22H,2-3,6-9,12-17H2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=HWHLPVGTWGOCJO-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 31250,
            "identifier": "2551",
            "identifier_type": "int",
            "name": "GABPA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2551",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "GA binding protein transcription factor, alpha subunit 60kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 31251,
            "identifier": "GO:0002831",
            "identifier_type": "str",
            "name": "regulation of response to biotic stimulus",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002831",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31252,
            "identifier": "139716",
            "identifier_type": "int",
            "name": "GAB3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/139716",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "GRB2-associated binding protein 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 31253,
            "identifier": "100129098",
            "identifier_type": "int",
            "name": "LOC100129098",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100129098",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "serine/arginine repetitive matrix protein 2-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 31254,
            "identifier": "135948",
            "identifier_type": "int",
            "name": "OR2F2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/135948",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "olfactory receptor, family 2, subfamily F, member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 31255,
            "identifier": "55026",
            "identifier_type": "int",
            "name": "TMEM255A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55026",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "transmembrane protein 255A"
            },
            "metanode": "Gene"
        },
        {
            "id": 31256,
            "identifier": "22843",
            "identifier_type": "int",
            "name": "PPM1E",
            "properties": {
                "url": "http://identifiers.org/ncbigene/22843",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "protein phosphatase, Mg2+/Mn2+ dependent, 1E"
            },
            "metanode": "Gene"
        },
        {
            "id": 31257,
            "identifier": "GO:0030947",
            "identifier_type": "str",
            "name": "regulation of vascular endothelial growth factor receptor signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030947",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31258,
            "identifier": "7329",
            "identifier_type": "int",
            "name": "UBE2I",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7329",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "ubiquitin-conjugating enzyme E2I"
            },
            "metanode": "Gene"
        },
        {
            "id": 31259,
            "identifier": "C0403673",
            "identifier_type": "str",
            "name": "Retrograde ejaculation",
            "properties": {
                "url": "http://identifiers.org/umls/C0403673",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31260,
            "identifier": "GO:1904884",
            "identifier_type": "str",
            "name": "positive regulation of telomerase catalytic core complex assembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904884",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31261,
            "identifier": "GO:0042744",
            "identifier_type": "str",
            "name": "hydrogen peroxide catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042744",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31262,
            "identifier": "GO:0031058",
            "identifier_type": "str",
            "name": "positive regulation of histone modification",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0031058",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31263,
            "identifier": "541466",
            "identifier_type": "int",
            "name": "CT45A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/541466",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "cancer/testis antigen family 45, member A1"
            },
            "metanode": "Gene"
        },
        {
            "id": 31264,
            "identifier": "PC7_3957",
            "identifier_type": "str",
            "name": "Formation of ATP by chemiosmotic coupling",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 31265,
            "identifier": "C0546817",
            "identifier_type": "str",
            "name": "Fluid overload",
            "properties": {
                "url": "http://identifiers.org/umls/C0546817",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31266,
            "identifier": "406",
            "identifier_type": "int",
            "name": "ARNTL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/406",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "aryl hydrocarbon receptor nuclear translocator-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 31267,
            "identifier": "9153",
            "identifier_type": "int",
            "name": "SLC28A2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9153",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "solute carrier family 28 (concentrative nucleoside transporter), member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 31268,
            "identifier": "55355",
            "identifier_type": "int",
            "name": "HJURP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55355",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "Holliday junction recognition protein"
            },
            "metanode": "Gene"
        }
    ]
}