Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=31425

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=31450",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=31400",
    "results": [
        {
            "id": 31419,
            "identifier": "C0235839",
            "identifier_type": "str",
            "name": "Fever neonatal",
            "properties": {
                "url": "http://identifiers.org/umls/C0235839",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31420,
            "identifier": "C0007863",
            "identifier_type": "str",
            "name": "Occipital neuralgia",
            "properties": {
                "url": "http://identifiers.org/umls/C0007863",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31421,
            "identifier": "204801",
            "identifier_type": "int",
            "name": "NLRP11",
            "properties": {
                "url": "http://identifiers.org/ncbigene/204801",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "NLR family, pyrin domain containing 11"
            },
            "metanode": "Gene"
        },
        {
            "id": 31422,
            "identifier": "GO:0032986",
            "identifier_type": "str",
            "name": "protein-DNA complex disassembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032986",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31423,
            "identifier": "C0235315",
            "identifier_type": "str",
            "name": "Faeces discoloured",
            "properties": {
                "url": "http://identifiers.org/umls/C0235315",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31424,
            "identifier": "GO:0034511",
            "identifier_type": "str",
            "name": "U3 snoRNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034511",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 31425,
            "identifier": "101928635",
            "identifier_type": "int",
            "name": "LOC101928635",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101928635",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "uncharacterized LOC101928635"
            },
            "metanode": "Gene"
        },
        {
            "id": 31426,
            "identifier": "388364",
            "identifier_type": "int",
            "name": "TMIGD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/388364",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "transmembrane and immunoglobulin domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 31427,
            "identifier": "GO:0051481",
            "identifier_type": "str",
            "name": "negative regulation of cytosolic calcium ion concentration",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051481",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31428,
            "identifier": "1427",
            "identifier_type": "int",
            "name": "CRYGS",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1427",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "crystallin, gamma S"
            },
            "metanode": "Gene"
        },
        {
            "id": 31429,
            "identifier": "10190",
            "identifier_type": "int",
            "name": "TXNDC9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10190",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "thioredoxin domain containing 9"
            },
            "metanode": "Gene"
        },
        {
            "id": 31430,
            "identifier": "DB00642",
            "identifier_type": "str",
            "name": "Pemetrexed",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00642",
                "inchi": "InChI=1S/C20H21N5O6/c21-20-24-16-15(18(29)25-20)12(9-22-16)6-3-10-1-4-11(5-2-10)17(28)23-13(19(30)31)7-8-14(26)27/h1-2,4-5,9,13H,3,6-8H2,(H,23,28)(H,26,27)(H,30,31)(H4,21,22,24,25,29)/t13-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=WBXPDJSOTKVWSJ-CYBMUJFWSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 31431,
            "identifier": "C2720436",
            "identifier_type": "str",
            "name": "Pleural fibrosis",
            "properties": {
                "url": "http://identifiers.org/umls/C2720436",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31432,
            "identifier": "GO:0016413",
            "identifier_type": "str",
            "name": "O-acetyltransferase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016413",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 31433,
            "identifier": "3880",
            "identifier_type": "int",
            "name": "KRT19",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3880",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "keratin 19, type I"
            },
            "metanode": "Gene"
        },
        {
            "id": 31434,
            "identifier": "8547",
            "identifier_type": "int",
            "name": "FCN3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8547",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "ficolin (collagen/fibrinogen domain containing) 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 31435,
            "identifier": "118472",
            "identifier_type": "int",
            "name": "ZNF511",
            "properties": {
                "url": "http://identifiers.org/ncbigene/118472",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "zinc finger protein 511"
            },
            "metanode": "Gene"
        },
        {
            "id": 31436,
            "identifier": "DB00788",
            "identifier_type": "str",
            "name": "Naproxen",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00788",
                "inchi": "InChI=1S/C14H14O3/c1-9(14(15)16)10-3-4-12-8-13(17-2)6-5-11(12)7-10/h3-9H,1-2H3,(H,15,16)/t9-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CMWTZPSULFXXJA-VIFPVBQESA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 31437,
            "identifier": "C0542149",
            "identifier_type": "str",
            "name": "Injection site phlebitis",
            "properties": {
                "url": "http://identifiers.org/umls/C0542149",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31438,
            "identifier": "GO:0008285",
            "identifier_type": "str",
            "name": "negative regulation of cell proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008285",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31439,
            "identifier": "GO:0004003",
            "identifier_type": "str",
            "name": "ATP-dependent DNA helicase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004003",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 31440,
            "identifier": "DB00452",
            "identifier_type": "str",
            "name": "Framycetin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00452",
                "inchi": "InChI=1S/C23H46N6O13/c24-2-7-13(32)15(34)10(28)21(37-7)40-18-6(27)1-5(26)12(31)20(18)42-23-17(36)19(9(4-30)39-23)41-22-11(29)16(35)14(33)8(3-25)38-22/h5-23,30-36H,1-4,24-29H2/t5-,6+,7-,8+,9-,10-,11-,12+,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=PGBHMTALBVVCIT-VCIWKGPPSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 31441,
            "identifier": "GO:1990253",
            "identifier_type": "str",
            "name": "cellular response to leucine starvation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1990253",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31442,
            "identifier": "GO:0045932",
            "identifier_type": "str",
            "name": "negative regulation of muscle contraction",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045932",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31443,
            "identifier": "C0038166",
            "identifier_type": "str",
            "name": "Staphylococcal skin infection",
            "properties": {
                "url": "http://identifiers.org/umls/C0038166",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}