Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=31950

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=31975",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=31925",
    "results": [
        {
            "id": 31945,
            "identifier": "C0235369",
            "identifier_type": "str",
            "name": "Hepatitis granulomatous",
            "properties": {
                "url": "http://identifiers.org/umls/C0235369",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 31946,
            "identifier": "25949",
            "identifier_type": "int",
            "name": "SYF2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/25949",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "SYF2 pre-mRNA-splicing factor"
            },
            "metanode": "Gene"
        },
        {
            "id": 31947,
            "identifier": "1672",
            "identifier_type": "int",
            "name": "DEFB1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1672",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "defensin, beta 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 31948,
            "identifier": "DB05039",
            "identifier_type": "str",
            "name": "Indacaterol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB05039",
                "inchi": "InChI=1S/C24H28N2O3/c1-3-14-9-16-11-18(12-17(16)10-15(14)4-2)25-13-22(28)19-5-7-21(27)24-20(19)6-8-23(29)26-24/h5-10,18,22,25,27-28H,3-4,11-13H2,1-2H3,(H,26,29)/t22-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=QZZUEBNBZAPZLX-QFIPXVFZSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 31949,
            "identifier": "89887",
            "identifier_type": "int",
            "name": "ZNF628",
            "properties": {
                "url": "http://identifiers.org/ncbigene/89887",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 628"
            },
            "metanode": "Gene"
        },
        {
            "id": 31950,
            "identifier": "GO:0004105",
            "identifier_type": "str",
            "name": "choline-phosphate cytidylyltransferase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004105",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 31951,
            "identifier": "GO:0000049",
            "identifier_type": "str",
            "name": "tRNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000049",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 31952,
            "identifier": "GO:0008808",
            "identifier_type": "str",
            "name": "cardiolipin synthase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008808",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 31953,
            "identifier": "8792",
            "identifier_type": "int",
            "name": "TNFRSF11A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8792",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "tumor necrosis factor receptor superfamily, member 11a, NFKB activator"
            },
            "metanode": "Gene"
        },
        {
            "id": 31954,
            "identifier": "GO:0004019",
            "identifier_type": "str",
            "name": "adenylosuccinate synthase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004019",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 31955,
            "identifier": "GO:0010739",
            "identifier_type": "str",
            "name": "positive regulation of protein kinase A signaling",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010739",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31956,
            "identifier": "728090",
            "identifier_type": "int",
            "name": "CT47A2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/728090",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "cancer/testis antigen family 47, member A2"
            },
            "metanode": "Gene"
        },
        {
            "id": 31957,
            "identifier": "81493",
            "identifier_type": "int",
            "name": "SYNC",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81493",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "syncoilin, intermediate filament protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 31958,
            "identifier": "GO:0000347",
            "identifier_type": "str",
            "name": "THO complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000347",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 31959,
            "identifier": "105378107",
            "identifier_type": "int",
            "name": "LOC105378107",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105378107",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "uncharacterized LOC105378107"
            },
            "metanode": "Gene"
        },
        {
            "id": 31960,
            "identifier": "2626",
            "identifier_type": "int",
            "name": "GATA4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2626",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "GATA binding protein 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 31961,
            "identifier": "11261",
            "identifier_type": "int",
            "name": "CHP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11261",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "calcineurin-like EF-hand protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 31962,
            "identifier": "GO:0034236",
            "identifier_type": "str",
            "name": "protein kinase A catalytic subunit binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034236",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 31963,
            "identifier": "GO:0090231",
            "identifier_type": "str",
            "name": "regulation of spindle checkpoint",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090231",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31964,
            "identifier": "GO:1902253",
            "identifier_type": "str",
            "name": "regulation of intrinsic apoptotic signaling pathway by p53 class mediator",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902253",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 31965,
            "identifier": "PC7_12188",
            "identifier_type": "str",
            "name": "negative regulation of TCF-dependent signaling by WNT ligand antagonists",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 31966,
            "identifier": "5095",
            "identifier_type": "int",
            "name": "PCCA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5095",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "propionyl CoA carboxylase, alpha polypeptide"
            },
            "metanode": "Gene"
        },
        {
            "id": 31967,
            "identifier": "55117",
            "identifier_type": "int",
            "name": "SLC6A15",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55117",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "solute carrier family 6 (neutral amino acid transporter), member 15"
            },
            "metanode": "Gene"
        },
        {
            "id": 31968,
            "identifier": "GO:0070160",
            "identifier_type": "str",
            "name": "occluding junction",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070160",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 31969,
            "identifier": "GO:0034358",
            "identifier_type": "str",
            "name": "plasma lipoprotein particle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034358",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        }
    ]
}