Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=32075

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=32100",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=32050",
    "results": [
        {
            "id": 32069,
            "identifier": "178",
            "identifier_type": "int",
            "name": "AGL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/178",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase"
            },
            "metanode": "Gene"
        },
        {
            "id": 32070,
            "identifier": "8941",
            "identifier_type": "int",
            "name": "CDK5R2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8941",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "cyclin-dependent kinase 5, regulatory subunit 2 (p39)"
            },
            "metanode": "Gene"
        },
        {
            "id": 32071,
            "identifier": "728239",
            "identifier_type": "int",
            "name": "MAGED4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/728239",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "melanoma antigen family D4"
            },
            "metanode": "Gene"
        },
        {
            "id": 32072,
            "identifier": "81626",
            "identifier_type": "int",
            "name": "SHCBP1L",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81626",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "SHC SH2-domain binding protein 1-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 32073,
            "identifier": "5360",
            "identifier_type": "int",
            "name": "PLTP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5360",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "phospholipid transfer protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 32074,
            "identifier": "GO:1904352",
            "identifier_type": "str",
            "name": "positive regulation of protein catabolic process in the vacuole",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904352",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32075,
            "identifier": "284513",
            "identifier_type": "int",
            "name": "LOC284513",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284513",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "uncharacterized LOC284513"
            },
            "metanode": "Gene"
        },
        {
            "id": 32076,
            "identifier": "UBERON:0002135",
            "identifier_type": "str",
            "name": "mitral valve",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0002135",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D008943"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 32077,
            "identifier": "2775",
            "identifier_type": "int",
            "name": "GNAO1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2775",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O"
            },
            "metanode": "Gene"
        },
        {
            "id": 32078,
            "identifier": "11266",
            "identifier_type": "int",
            "name": "DUSP12",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11266",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "dual specificity phosphatase 12"
            },
            "metanode": "Gene"
        },
        {
            "id": 32079,
            "identifier": "GO:0090311",
            "identifier_type": "str",
            "name": "regulation of protein deacetylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090311",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32080,
            "identifier": "51302",
            "identifier_type": "int",
            "name": "CYP39A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51302",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "cytochrome P450, family 39, subfamily A, polypeptide 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 32081,
            "identifier": "79999",
            "identifier_type": "int",
            "name": "LOC79999",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79999",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "uncharacterized LOC79999"
            },
            "metanode": "Gene"
        },
        {
            "id": 32082,
            "identifier": "5228",
            "identifier_type": "int",
            "name": "PGF",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5228",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "placental growth factor"
            },
            "metanode": "Gene"
        },
        {
            "id": 32083,
            "identifier": "55250",
            "identifier_type": "int",
            "name": "ELP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55250",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "elongator acetyltransferase complex subunit 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 32084,
            "identifier": "DB06228",
            "identifier_type": "str",
            "name": "Rivaroxaban",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06228",
                "inchi": "InChI=1S/C19H18ClN3O5S/c20-16-6-5-15(29-16)18(25)21-9-14-10-23(19(26)28-14)13-3-1-12(2-4-13)22-7-8-27-11-17(22)24/h1-6,14H,7-11H2,(H,21,25)/t14-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=KGFYHTZWPPHNLQ-AWEZNQCLSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 32085,
            "identifier": "23067",
            "identifier_type": "int",
            "name": "SETD1B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23067",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "SET domain containing 1B"
            },
            "metanode": "Gene"
        },
        {
            "id": 32086,
            "identifier": "7553",
            "identifier_type": "int",
            "name": "ZNF7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7553",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "zinc finger protein 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 32087,
            "identifier": "GO:0034062",
            "identifier_type": "str",
            "name": "RNA polymerase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034062",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 32088,
            "identifier": "GO:0044027",
            "identifier_type": "str",
            "name": "hypermethylation of CpG island",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044027",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32089,
            "identifier": "392255",
            "identifier_type": "int",
            "name": "GDF6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/392255",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "growth differentiation factor 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 32090,
            "identifier": "DB01207",
            "identifier_type": "str",
            "name": "Ridogrel",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01207",
                "inchi": "InChI=1S/C18H17F3N2O3/c19-18(20,21)15-7-3-5-13(11-15)17(14-6-4-9-22-12-14)23-26-10-2-1-8-16(24)25/h3-7,9,11-12H,1-2,8,10H2,(H,24,25)/b23-17+",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GLLPUTYLZIKEGF-HAVVHWLPSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 32091,
            "identifier": "100287979",
            "identifier_type": "int",
            "name": "TTTY13C",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100287979",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "Y",
                "description": "testis-specific transcript, Y-linked 13C"
            },
            "metanode": "Gene"
        },
        {
            "id": 32092,
            "identifier": "GO:0031901",
            "identifier_type": "str",
            "name": "early endosome membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0031901",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 32093,
            "identifier": "64711",
            "identifier_type": "int",
            "name": "HS3ST6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/64711",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "heparan sulfate (glucosamine) 3-O-sulfotransferase 6"
            },
            "metanode": "Gene"
        }
    ]
}