Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=32550

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=32575",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=32525",
    "results": [
        {
            "id": 32544,
            "identifier": "DB01367",
            "identifier_type": "str",
            "name": "Rasagiline",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01367",
                "inchi": "InChI=1S/C12H13N/c1-2-9-13-12-8-7-10-5-3-4-6-11(10)12/h1,3-6,12-13H,7-9H2/t12-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=RUOKEQAAGRXIBM-GFCCVEGCSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 32545,
            "identifier": "GO:0004830",
            "identifier_type": "str",
            "name": "tryptophan-tRNA ligase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004830",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 32546,
            "identifier": "GO:1901204",
            "identifier_type": "str",
            "name": "regulation of adrenergic receptor signaling pathway involved in heart process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901204",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32547,
            "identifier": "GO:0045063",
            "identifier_type": "str",
            "name": "T-helper 1 cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045063",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32548,
            "identifier": "DB00225",
            "identifier_type": "str",
            "name": "Gadodiamide",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00225",
                "inchi": "InChI=1S/C16H29N5O8.Gd.H2O/c1-17-12(22)7-20(10-15(26)27)5-3-19(9-14(24)25)4-6-21(11-16(28)29)8-13(23)18-2;;/h3-11H2,1-2H3,(H,17,22)(H,18,23)(H,24,25)(H,26,27)(H,28,29);;1H2/q;+3;/p-3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=XPCLDSMKWNNKOM-UHFFFAOYSA-K"
            },
            "metanode": "Compound"
        },
        {
            "id": 32549,
            "identifier": "100996414",
            "identifier_type": "int",
            "name": "LOC100996414",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100996414",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "putative uncharacterized protein FLJ92257"
            },
            "metanode": "Gene"
        },
        {
            "id": 32550,
            "identifier": "D020335",
            "identifier_type": "str",
            "name": "Paraparesis",
            "properties": {
                "url": "http://identifiers.org/mesh/D020335",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 32551,
            "identifier": "9361",
            "identifier_type": "int",
            "name": "LONP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9361",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "lon peptidase 1, mitochondrial"
            },
            "metanode": "Gene"
        },
        {
            "id": 32552,
            "identifier": "643641",
            "identifier_type": "int",
            "name": "ZNF862",
            "properties": {
                "url": "http://identifiers.org/ncbigene/643641",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "zinc finger protein 862"
            },
            "metanode": "Gene"
        },
        {
            "id": 32553,
            "identifier": "PC7_6813",
            "identifier_type": "str",
            "name": "RNA Polymerase III Transcription Initiation From Type 3 Promoter",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 32554,
            "identifier": "23",
            "identifier_type": "int",
            "name": "ABCF1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "ATP-binding cassette, sub-family F (GCN20), member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 32555,
            "identifier": "GO:1990667",
            "identifier_type": "str",
            "name": "PCSK9-AnxA2 complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1990667",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 32556,
            "identifier": "GO:0038095",
            "identifier_type": "str",
            "name": "Fc-epsilon receptor signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0038095",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32557,
            "identifier": "100507588",
            "identifier_type": "int",
            "name": "TGFBR3L",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100507588",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "transforming growth factor, beta receptor III-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 32558,
            "identifier": "504191",
            "identifier_type": "int",
            "name": "OR9G9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/504191",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 9, subfamily G, member 9"
            },
            "metanode": "Gene"
        },
        {
            "id": 32559,
            "identifier": "GO:0004776",
            "identifier_type": "str",
            "name": "succinate-CoA ligase (GDP-forming) activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004776",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 32560,
            "identifier": "5648",
            "identifier_type": "int",
            "name": "MASP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5648",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)"
            },
            "metanode": "Gene"
        },
        {
            "id": 32561,
            "identifier": "GO:0008066",
            "identifier_type": "str",
            "name": "glutamate receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008066",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 32562,
            "identifier": "90637",
            "identifier_type": "int",
            "name": "ZFAND2A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/90637",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "zinc finger, AN1-type domain 2A"
            },
            "metanode": "Gene"
        },
        {
            "id": 32563,
            "identifier": "PC7_8677",
            "identifier_type": "str",
            "name": "Validated targets of C-MYC transcriptional activation",
            "properties": {
                "source": "PID via Pathway Commons",
                "license": "CC0 1.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 32564,
            "identifier": "375444",
            "identifier_type": "int",
            "name": "C5orf34",
            "properties": {
                "url": "http://identifiers.org/ncbigene/375444",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "chromosome 5 open reading frame 34"
            },
            "metanode": "Gene"
        },
        {
            "id": 32565,
            "identifier": "23759",
            "identifier_type": "int",
            "name": "PPIL2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23759",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "peptidylprolyl isomerase (cyclophilin)-like 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 32566,
            "identifier": "GO:0048711",
            "identifier_type": "str",
            "name": "positive regulation of astrocyte differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048711",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32567,
            "identifier": "GO:0061085",
            "identifier_type": "str",
            "name": "regulation of histone H3-K27 methylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061085",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32568,
            "identifier": "GO:0031247",
            "identifier_type": "str",
            "name": "actin rod assembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0031247",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}