Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=32700

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=32725",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=32675",
    "results": [
        {
            "id": 32693,
            "identifier": "GO:0030627",
            "identifier_type": "str",
            "name": "pre-mRNA 5'-splice site binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030627",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 32694,
            "identifier": "DB00253",
            "identifier_type": "str",
            "name": "Medrysone",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00253",
                "inchi": "InChI=1S/C22H32O3/c1-12-9-15-17-6-5-16(13(2)23)22(17,4)11-19(25)20(15)21(3)8-7-14(24)10-18(12)21/h10,12,15-17,19-20,25H,5-9,11H2,1-4H3/t12-,15-,16+,17-,19-,20+,21-,22+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GZENKSODFLBBHQ-ILSZZQPISA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 32695,
            "identifier": "GO:0098734",
            "identifier_type": "str",
            "name": "macromolecule depalmitoylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0098734",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32696,
            "identifier": "PC7_6652",
            "identifier_type": "str",
            "name": "Purine metabolism",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 32697,
            "identifier": "GO:0060099",
            "identifier_type": "str",
            "name": "regulation of phagocytosis, engulfment",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060099",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32698,
            "identifier": "8447",
            "identifier_type": "int",
            "name": "DOC2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8447",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "double C2-like domains, beta"
            },
            "metanode": "Gene"
        },
        {
            "id": 32699,
            "identifier": "GO:0097028",
            "identifier_type": "str",
            "name": "dendritic cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097028",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32700,
            "identifier": "136227",
            "identifier_type": "int",
            "name": "COL26A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/136227",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "collagen, type XXVI, alpha 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 32701,
            "identifier": "C0085623",
            "identifier_type": "str",
            "name": "Akinesia",
            "properties": {
                "url": "http://identifiers.org/umls/C0085623",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 32702,
            "identifier": "DB00276",
            "identifier_type": "str",
            "name": "Amsacrine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00276",
                "inchi": "InChI=1S/C21H19N3O3S/c1-27-20-13-14(24-28(2,25)26)11-12-19(20)23-21-15-7-3-5-9-17(15)22-18-10-6-4-8-16(18)21/h3-13,24H,1-2H3,(H,22,23)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=XCPGHVQEEXUHNC-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 32703,
            "identifier": "10772",
            "identifier_type": "int",
            "name": "SRSF10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10772",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "serine/arginine-rich splicing factor 10"
            },
            "metanode": "Gene"
        },
        {
            "id": 32704,
            "identifier": "C1142272",
            "identifier_type": "str",
            "name": "Neutrophilic dermatosis",
            "properties": {
                "url": "http://identifiers.org/umls/C1142272",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 32705,
            "identifier": "GO:0004779",
            "identifier_type": "str",
            "name": "sulfate adenylyltransferase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004779",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 32706,
            "identifier": "DB00815",
            "identifier_type": "str",
            "name": "Sodium lauryl sulfate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00815",
                "inchi": "InChI=1S/C12H26O4S.Na/c1-2-3-4-5-6-7-8-9-10-11-12-16-17(13,14)15;/h2-12H2,1H3,(H,13,14,15);/q;+1/p-1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=DBMJMQXJHONAFJ-UHFFFAOYSA-M"
            },
            "metanode": "Compound"
        },
        {
            "id": 32707,
            "identifier": "132112",
            "identifier_type": "int",
            "name": "RTP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/132112",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "receptor (chemosensory) transporter protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 32708,
            "identifier": "C0428196",
            "identifier_type": "str",
            "name": "Bicarbonate level",
            "properties": {
                "url": "http://identifiers.org/umls/C0428196",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 32709,
            "identifier": "102724200",
            "identifier_type": "int",
            "name": "LOC102724200",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724200",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "trafficking protein particle complex subunit 10-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 32710,
            "identifier": "C0085682",
            "identifier_type": "str",
            "name": "Hypophosphataemia",
            "properties": {
                "url": "http://identifiers.org/umls/C0085682",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 32711,
            "identifier": "4734",
            "identifier_type": "int",
            "name": "NEDD4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4734",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase"
            },
            "metanode": "Gene"
        },
        {
            "id": 32712,
            "identifier": "54756",
            "identifier_type": "int",
            "name": "IL17RD",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54756",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "interleukin 17 receptor D"
            },
            "metanode": "Gene"
        },
        {
            "id": 32713,
            "identifier": "GO:0030001",
            "identifier_type": "str",
            "name": "metal ion transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030001",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 32714,
            "identifier": "7059",
            "identifier_type": "int",
            "name": "THBS3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7059",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "thrombospondin 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 32715,
            "identifier": "146894",
            "identifier_type": "int",
            "name": "CD300LG",
            "properties": {
                "url": "http://identifiers.org/ncbigene/146894",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "CD300 molecule-like family member g"
            },
            "metanode": "Gene"
        },
        {
            "id": 32716,
            "identifier": "57209",
            "identifier_type": "int",
            "name": "ZNF248",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57209",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "zinc finger protein 248"
            },
            "metanode": "Gene"
        },
        {
            "id": 32717,
            "identifier": "C1740836",
            "identifier_type": "str",
            "name": "Acute migraine",
            "properties": {
                "url": "http://identifiers.org/umls/C1740836",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}