Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=32875
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=32900", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=32850", "results": [ { "id": 32868, "identifier": "GO:0006560", "identifier_type": "str", "name": "proline metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006560", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 32869, "identifier": "DB00456", "identifier_type": "str", "name": "Cefalotin", "properties": { "url": "http://www.drugbank.ca/drugs/DB00456", "inchi": "InChI=1S/C16H16N2O6S2/c1-8(19)24-6-9-7-26-15-12(14(21)18(15)13(9)16(22)23)17-11(20)5-10-3-2-4-25-10/h2-4,12,15H,5-7H2,1H3,(H,17,20)(H,22,23)/t12-,15-/m1/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=XIURVHNZVLADCM-IUODEOHRSA-N" }, "metanode": "Compound" }, { "id": 32870, "identifier": "23286", "identifier_type": "int", "name": "WWC1", "properties": { "url": "http://identifiers.org/ncbigene/23286", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "WW and C2 domain containing 1" }, "metanode": "Gene" }, { "id": 32871, "identifier": "DB00884", "identifier_type": "str", "name": "Risedronate", "properties": { "url": "http://www.drugbank.ca/drugs/DB00884", "inchi": "InChI=1S/C7H11NO7P2/c9-7(16(10,11)12,17(13,14)15)4-6-2-1-3-8-5-6/h1-3,5,9H,4H2,(H2,10,11,12)(H2,13,14,15)", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=IIDJRNMFWXDHID-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 32872, "identifier": "7772", "identifier_type": "int", "name": "ZNF229", "properties": { "url": "http://identifiers.org/ncbigene/7772", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 229" }, "metanode": "Gene" }, { "id": 32873, "identifier": "PC7_7262", "identifier_type": "str", "name": "SHC-mediated cascade", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 32874, "identifier": "83998", "identifier_type": "int", "name": "REG4", "properties": { "url": "http://identifiers.org/ncbigene/83998", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "regenerating islet-derived family, member 4" }, "metanode": "Gene" }, { "id": 32875, "identifier": "92745", "identifier_type": "int", "name": "SLC38A5", "properties": { "url": "http://identifiers.org/ncbigene/92745", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "solute carrier family 38, member 5" }, "metanode": "Gene" }, { "id": 32876, "identifier": "GO:0060348", "identifier_type": "str", "name": "bone development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060348", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 32877, "identifier": "339263", "identifier_type": "int", "name": "C17orf51", "properties": { "url": "http://identifiers.org/ncbigene/339263", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "chromosome 17 open reading frame 51" }, "metanode": "Gene" }, { "id": 32878, "identifier": "C0004044", "identifier_type": "str", "name": "Asphyxia", "properties": { "url": "http://identifiers.org/umls/C0004044", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 32879, "identifier": "26609", "identifier_type": "int", "name": "VCX", "properties": { "url": "http://identifiers.org/ncbigene/26609", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "variable charge, X-linked" }, "metanode": "Gene" }, { "id": 32880, "identifier": "102724652", "identifier_type": "int", "name": "LOC102724652", "properties": { "url": "http://identifiers.org/ncbigene/102724652", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "21", "description": "alpha-crystallin A chain" }, "metanode": "Gene" }, { "id": 32881, "identifier": "GO:1903265", "identifier_type": "str", "name": "positive regulation of tumor necrosis factor-mediated signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903265", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 32882, "identifier": "833", "identifier_type": "int", "name": "CARS", "properties": { "url": "http://identifiers.org/ncbigene/833", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "cysteinyl-tRNA synthetase" }, "metanode": "Gene" }, { "id": 32883, "identifier": "9468", "identifier_type": "int", "name": "PCYT1B", "properties": { "url": "http://identifiers.org/ncbigene/9468", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "phosphate cytidylyltransferase 1, choline, beta" }, "metanode": "Gene" }, { "id": 32884, "identifier": "170082", "identifier_type": "int", "name": "TCEANC", "properties": { "url": "http://identifiers.org/ncbigene/170082", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "transcription elongation factor A (SII) N-terminal and central domain containing" }, "metanode": "Gene" }, { "id": 32885, "identifier": "51661", "identifier_type": "int", "name": "FKBP7", "properties": { "url": "http://identifiers.org/ncbigene/51661", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "FK506 binding protein 7" }, "metanode": "Gene" }, { "id": 32886, "identifier": "GO:0015677", "identifier_type": "str", "name": "copper ion import", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015677", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 32887, "identifier": "GO:0030042", "identifier_type": "str", "name": "actin filament depolymerization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030042", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 32888, "identifier": "GO:0001161", "identifier_type": "str", "name": "intronic transcription regulatory region sequence-specific DNA binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0001161", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 32889, "identifier": "345930", "identifier_type": "int", "name": "ECT2L", "properties": { "url": "http://identifiers.org/ncbigene/345930", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "epithelial cell transforming 2 like" }, "metanode": "Gene" }, { "id": 32890, "identifier": "442444", "identifier_type": "int", "name": "FAM47C", "properties": { "url": "http://identifiers.org/ncbigene/442444", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "family with sequence similarity 47, member C" }, "metanode": "Gene" }, { "id": 32891, "identifier": "C0156312", "identifier_type": "str", "name": "Testicular atrophy", "properties": { "url": "http://identifiers.org/umls/C0156312", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 32892, "identifier": "GO:0009216", "identifier_type": "str", "name": "purine deoxyribonucleoside triphosphate biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009216", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }