Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=33025
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33050", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33000", "results": [ { "id": 33018, "identifier": "1290", "identifier_type": "int", "name": "COL5A2", "properties": { "url": "http://identifiers.org/ncbigene/1290", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "collagen, type V, alpha 2" }, "metanode": "Gene" }, { "id": 33019, "identifier": "10053", "identifier_type": "int", "name": "AP1M2", "properties": { "url": "http://identifiers.org/ncbigene/10053", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "adaptor-related protein complex 1, mu 2 subunit" }, "metanode": "Gene" }, { "id": 33020, "identifier": "DB01280", "identifier_type": "str", "name": "Nelarabine", "properties": { "url": "http://www.drugbank.ca/drugs/DB01280", "inchi": "InChI=1S/C11H15N5O5/c1-20-9-5-8(14-11(12)15-9)16(3-13-5)10-7(19)6(18)4(2-17)21-10/h3-4,6-7,10,17-19H,2H2,1H3,(H2,12,14,15)/t4-,6-,7+,10-/m1/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=IXOXBSCIXZEQEQ-UHTZMRCNSA-N" }, "metanode": "Compound" }, { "id": 33021, "identifier": "DB06811", "identifier_type": "str", "name": "Polidocanol", "properties": { "url": "http://www.drugbank.ca/drugs/DB06811", "inchi": "InChI=1S/C14H30O2/c1-2-3-4-5-6-7-8-9-10-11-13-16-14-12-15/h15H,2-14H2,1H3", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=SFNALCNOMXIBKG-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 33596, "identifier": "PC7_7428", "identifier_type": "str", "name": "Serine biosynthesis", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 33022, "identifier": "GO:0032483", "identifier_type": "str", "name": "regulation of Rab protein signal transduction", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032483", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33023, "identifier": "WP3529_r84285", "identifier_type": "str", "name": "Zinc homeostasis", "properties": { "url": "http://www.wikipathways.org/instance/WP3529_r84285", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 33024, "identifier": "3759", "identifier_type": "int", "name": "KCNJ2", "properties": { "url": "http://identifiers.org/ncbigene/3759", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "potassium channel, inwardly rectifying subfamily J, member 2" }, "metanode": "Gene" }, { "id": 33025, "identifier": "GO:0044783", "identifier_type": "str", "name": "G1 DNA damage checkpoint", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0044783", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33026, "identifier": "GO:0006164", "identifier_type": "str", "name": "purine nucleotide biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006164", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33027, "identifier": "GO:0006970", "identifier_type": "str", "name": "response to osmotic stress", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006970", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33028, "identifier": "646658", "identifier_type": "int", "name": "SYNDIG1L", "properties": { "url": "http://identifiers.org/ncbigene/646658", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "synapse differentiation inducing 1-like" }, "metanode": "Gene" }, { "id": 33029, "identifier": "GO:1903826", "identifier_type": "str", "name": "arginine transmembrane transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903826", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33030, "identifier": "152926", "identifier_type": "int", "name": "PPM1K", "properties": { "url": "http://identifiers.org/ncbigene/152926", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "protein phosphatase, Mg2+/Mn2+ dependent, 1K" }, "metanode": "Gene" }, { "id": 33031, "identifier": "84838", "identifier_type": "int", "name": "ZNF496", "properties": { "url": "http://identifiers.org/ncbigene/84838", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "zinc finger protein 496" }, "metanode": "Gene" }, { "id": 33032, "identifier": "2244", "identifier_type": "int", "name": "FGB", "properties": { "url": "http://identifiers.org/ncbigene/2244", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "fibrinogen beta chain" }, "metanode": "Gene" }, { "id": 33033, "identifier": "10879", "identifier_type": "int", "name": "SMR3B", "properties": { "url": "http://identifiers.org/ncbigene/10879", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "submaxillary gland androgen regulated protein 3B" }, "metanode": "Gene" }, { "id": 33034, "identifier": "N0000000176", "identifier_type": "str", "name": "Topoisomerase Inhibitors", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000000176", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Mechanism of Action" }, "metanode": "Pharmacologic Class" }, { "id": 33035, "identifier": "DB00159", "identifier_type": "str", "name": "Icosapent", "properties": { "url": "http://www.drugbank.ca/drugs/DB00159", "inchi": "InChI=1S/C20H30O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(21)22/h3-4,6-7,9-10,12-13,15-16H,2,5,8,11,14,17-19H2,1H3,(H,21,22)/b4-3-,7-6-,10-9-,13-12-,16-15-", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=JAZBEHYOTPTENJ-JLNKQSITSA-N" }, "metanode": "Compound" }, { "id": 33036, "identifier": "GO:0021536", "identifier_type": "str", "name": "diencephalon development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0021536", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33037, "identifier": "286451", "identifier_type": "int", "name": "YIPF6", "properties": { "url": "http://identifiers.org/ncbigene/286451", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "Yip1 domain family, member 6" }, "metanode": "Gene" }, { "id": 33038, "identifier": "4697", "identifier_type": "int", "name": "NDUFA4", "properties": { "url": "http://identifiers.org/ncbigene/4697", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "NDUFA4, mitochondrial complex associated" }, "metanode": "Gene" }, { "id": 33039, "identifier": "85019", "identifier_type": "int", "name": "TMEM241", "properties": { "url": "http://identifiers.org/ncbigene/85019", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "transmembrane protein 241" }, "metanode": "Gene" }, { "id": 33040, "identifier": "C1443060", "identifier_type": "str", "name": "Feeling abnormal", "properties": { "url": "http://identifiers.org/umls/C1443060", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 33041, "identifier": "284680", "identifier_type": "int", "name": "C1orf111", "properties": { "url": "http://identifiers.org/ncbigene/284680", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "chromosome 1 open reading frame 111" }, "metanode": "Gene" } ] }