Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=33050
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33075", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33025", "results": [ { "id": 33042, "identifier": "7166", "identifier_type": "int", "name": "TPH1", "properties": { "url": "http://identifiers.org/ncbigene/7166", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "tryptophan hydroxylase 1" }, "metanode": "Gene" }, { "id": 33043, "identifier": "PC7_2518", "identifier_type": "str", "name": "Cdc20:Phospho-APC/C mediated degradation of Cyclin A", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 33044, "identifier": "57188", "identifier_type": "int", "name": "ADAMTSL3", "properties": { "url": "http://identifiers.org/ncbigene/57188", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "ADAMTS-like 3" }, "metanode": "Gene" }, { "id": 33045, "identifier": "C0042065", "identifier_type": "str", "name": "Genitourinary tract neoplasm", "properties": { "url": "http://identifiers.org/umls/C0042065", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 33046, "identifier": "25875", "identifier_type": "int", "name": "LETMD1", "properties": { "url": "http://identifiers.org/ncbigene/25875", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "LETM1 domain containing 1" }, "metanode": "Gene" }, { "id": 33047, "identifier": "1870", "identifier_type": "int", "name": "E2F2", "properties": { "url": "http://identifiers.org/ncbigene/1870", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "E2F transcription factor 2" }, "metanode": "Gene" }, { "id": 33048, "identifier": "GO:0061188", "identifier_type": "str", "name": "negative regulation of chromatin silencing at rDNA", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0061188", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33049, "identifier": "79094", "identifier_type": "int", "name": "CHAC1", "properties": { "url": "http://identifiers.org/ncbigene/79094", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "ChaC glutathione-specific gamma-glutamylcyclotransferase 1" }, "metanode": "Gene" }, { "id": 33050, "identifier": "PC7_3167", "identifier_type": "str", "name": "Digestion of dietary lipid", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 33051, "identifier": "574537", "identifier_type": "int", "name": "UGT2A2", "properties": { "url": "http://identifiers.org/ncbigene/574537", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "UDP glucuronosyltransferase 2 family, polypeptide A2" }, "metanode": "Gene" }, { "id": 33052, "identifier": "343563", "identifier_type": "int", "name": "OR2T29", "properties": { "url": "http://identifiers.org/ncbigene/343563", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "olfactory receptor, family 2, subfamily T, member 29" }, "metanode": "Gene" }, { "id": 33053, "identifier": "GO:0043601", "identifier_type": "str", "name": "nuclear replisome", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043601", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 33054, "identifier": "GO:0003779", "identifier_type": "str", "name": "actin binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0003779", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 33055, "identifier": "11187", "identifier_type": "int", "name": "PKP3", "properties": { "url": "http://identifiers.org/ncbigene/11187", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "plakophilin 3" }, "metanode": "Gene" }, { "id": 33056, "identifier": "GO:1901090", "identifier_type": "str", "name": "regulation of protein tetramerization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1901090", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33057, "identifier": "GO:0000828", "identifier_type": "str", "name": "inositol hexakisphosphate kinase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0000828", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 33058, "identifier": "5021", "identifier_type": "int", "name": "OXTR", "properties": { "url": "http://identifiers.org/ncbigene/5021", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "oxytocin receptor" }, "metanode": "Gene" }, { "id": 33059, "identifier": "C0745744", "identifier_type": "str", "name": "End stage liver disease", "properties": { "url": "http://identifiers.org/umls/C0745744", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 33060, "identifier": "65989", "identifier_type": "int", "name": "DLK2", "properties": { "url": "http://identifiers.org/ncbigene/65989", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "delta-like 2 homolog (Drosophila)" }, "metanode": "Gene" }, { "id": 33061, "identifier": "C0085570", "identifier_type": "str", "name": "Alkalosis hypokalaemic", "properties": { "url": "http://identifiers.org/umls/C0085570", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 33062, "identifier": "23116", "identifier_type": "int", "name": "FAM179B", "properties": { "url": "http://identifiers.org/ncbigene/23116", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "family with sequence similarity 179, member B" }, "metanode": "Gene" }, { "id": 33063, "identifier": "7474", "identifier_type": "int", "name": "WNT5A", "properties": { "url": "http://identifiers.org/ncbigene/7474", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "wingless-type MMTV integration site family, member 5A" }, "metanode": "Gene" }, { "id": 33064, "identifier": "GO:0090109", "identifier_type": "str", "name": "regulation of cell-substrate junction assembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0090109", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33065, "identifier": "105369280", "identifier_type": "int", "name": "LOC105369280", "properties": { "url": "http://identifiers.org/ncbigene/105369280", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "cytochrome P450 2D4-like" }, "metanode": "Gene" }, { "id": 33066, "identifier": "GO:0042350", "identifier_type": "str", "name": "GDP-L-fucose biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042350", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }