Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=33375

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33400",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33350",
    "results": [
        {
            "id": 33369,
            "identifier": "PC7_2635",
            "identifier_type": "str",
            "name": "Cleavage of the damaged purine",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 33370,
            "identifier": "55150",
            "identifier_type": "int",
            "name": "C19orf73",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55150",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "chromosome 19 open reading frame 73"
            },
            "metanode": "Gene"
        },
        {
            "id": 33371,
            "identifier": "GO:0006555",
            "identifier_type": "str",
            "name": "methionine metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006555",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33372,
            "identifier": "C0853050",
            "identifier_type": "str",
            "name": "Blood acid phosphatase increased",
            "properties": {
                "url": "http://identifiers.org/umls/C0853050",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 33373,
            "identifier": "GO:0006677",
            "identifier_type": "str",
            "name": "glycosylceramide metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006677",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33374,
            "identifier": "DB00457",
            "identifier_type": "str",
            "name": "Prazosin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00457",
                "inchi": "InChI=1S/C19H21N5O4/c1-26-15-10-12-13(11-16(15)27-2)21-19(22-17(12)20)24-7-5-23(6-8-24)18(25)14-4-3-9-28-14/h3-4,9-11H,5-8H2,1-2H3,(H2,20,21,22)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=IENZQIKPVFGBNW-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 33375,
            "identifier": "7453",
            "identifier_type": "int",
            "name": "WARS",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7453",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "tryptophanyl-tRNA synthetase"
            },
            "metanode": "Gene"
        },
        {
            "id": 33376,
            "identifier": "GO:0004096",
            "identifier_type": "str",
            "name": "catalase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004096",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 33377,
            "identifier": "GO:0015884",
            "identifier_type": "str",
            "name": "folic acid transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015884",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33378,
            "identifier": "339184",
            "identifier_type": "int",
            "name": "CCDC144NL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/339184",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "coiled-coil domain containing 144 family, N-terminal like"
            },
            "metanode": "Gene"
        },
        {
            "id": 33379,
            "identifier": "GO:0045620",
            "identifier_type": "str",
            "name": "negative regulation of lymphocyte differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045620",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33380,
            "identifier": "26290",
            "identifier_type": "int",
            "name": "GALNT8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26290",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "polypeptide N-acetylgalactosaminyltransferase 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 33381,
            "identifier": "145645",
            "identifier_type": "int",
            "name": "C15orf43",
            "properties": {
                "url": "http://identifiers.org/ncbigene/145645",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "chromosome 15 open reading frame 43"
            },
            "metanode": "Gene"
        },
        {
            "id": 33382,
            "identifier": "55832",
            "identifier_type": "int",
            "name": "CAND1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55832",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "cullin-associated and neddylation-dissociated 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 33383,
            "identifier": "DB00448",
            "identifier_type": "str",
            "name": "Lansoprazole",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00448",
                "inchi": "InChI=1S/C16H14F3N3O2S/c1-10-13(20-7-6-14(10)24-9-16(17,18)19)8-25(23)15-21-11-4-2-3-5-12(11)22-15/h2-7H,8-9H2,1H3,(H,21,22)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=MJIHNNLFOKEZEW-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 33384,
            "identifier": "514",
            "identifier_type": "int",
            "name": "ATP5E",
            "properties": {
                "url": "http://identifiers.org/ncbigene/514",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit"
            },
            "metanode": "Gene"
        },
        {
            "id": 33385,
            "identifier": "9149",
            "identifier_type": "int",
            "name": "DYRK1B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9149",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B"
            },
            "metanode": "Gene"
        },
        {
            "id": 33386,
            "identifier": "DB00472",
            "identifier_type": "str",
            "name": "Fluoxetine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00472",
                "inchi": "InChI=1S/C17H18F3NO/c1-21-12-11-16(13-5-3-2-4-6-13)22-15-9-7-14(8-10-15)17(18,19)20/h2-10,16,21H,11-12H2,1H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=RTHCYVBBDHJXIQ-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 33387,
            "identifier": "105372481",
            "identifier_type": "int",
            "name": "LOC105372481",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105372481",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "uncharacterized LOC105372481"
            },
            "metanode": "Gene"
        },
        {
            "id": 33388,
            "identifier": "GO:0030174",
            "identifier_type": "str",
            "name": "regulation of DNA-dependent DNA replication initiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030174",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33389,
            "identifier": "GO:0000243",
            "identifier_type": "str",
            "name": "commitment complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000243",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 33390,
            "identifier": "27244",
            "identifier_type": "int",
            "name": "SESN1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27244",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "sestrin 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 33391,
            "identifier": "2983",
            "identifier_type": "int",
            "name": "GUCY1B3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2983",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "guanylate cyclase 1, soluble, beta 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 33392,
            "identifier": "DB00662",
            "identifier_type": "str",
            "name": "Trimethobenzamide",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00662",
                "inchi": "InChI=1S/C21H28N2O5/c1-23(2)10-11-28-17-8-6-15(7-9-17)14-22-21(24)16-12-18(25-3)20(27-5)19(13-16)26-4/h6-9,12-13H,10-11,14H2,1-5H3,(H,22,24)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=FEZBIKUBAYAZIU-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 33393,
            "identifier": "57528",
            "identifier_type": "int",
            "name": "KCTD16",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57528",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "potassium channel tetramerization domain containing 16"
            },
            "metanode": "Gene"
        }
    ]
}