Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=33425
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33450", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33400", "results": [ { "id": 33419, "identifier": "WP2203_r78549", "identifier_type": "str", "name": "TSLP Signaling Pathway", "properties": { "url": "http://www.wikipathways.org/instance/WP2203_r78549", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 33420, "identifier": "353133", "identifier_type": "int", "name": "LCE1C", "properties": { "url": "http://identifiers.org/ncbigene/353133", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "late cornified envelope 1C" }, "metanode": "Gene" }, { "id": 33421, "identifier": "PC7_2325", "identifier_type": "str", "name": "COPII (Coat Protein 2) Mediated Vesicle Transport", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 33422, "identifier": "GO:0015874", "identifier_type": "str", "name": "norepinephrine transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015874", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33423, "identifier": "D014012", "identifier_type": "str", "name": "Tinnitus", "properties": { "url": "http://identifiers.org/mesh/D014012", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 33424, "identifier": "C0549225", "identifier_type": "str", "name": "Myasthenic syndrome", "properties": { "url": "http://identifiers.org/umls/C0549225", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 33425, "identifier": "PC7_5157", "identifier_type": "str", "name": "MHC class II antigen presentation", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 33426, "identifier": "84823", "identifier_type": "int", "name": "LMNB2", "properties": { "url": "http://identifiers.org/ncbigene/84823", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "lamin B2" }, "metanode": "Gene" }, { "id": 33427, "identifier": "84503", "identifier_type": "int", "name": "ZNF527", "properties": { "url": "http://identifiers.org/ncbigene/84503", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 527" }, "metanode": "Gene" }, { "id": 33428, "identifier": "5066", "identifier_type": "int", "name": "PAM", "properties": { "url": "http://identifiers.org/ncbigene/5066", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "peptidylglycine alpha-amidating monooxygenase" }, "metanode": "Gene" }, { "id": 33429, "identifier": "PC7_2905", "identifier_type": "str", "name": "Cytochrome P450 - arranged by substrate type", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 33430, "identifier": "6698", "identifier_type": "int", "name": "SPRR1A", "properties": { "url": "http://identifiers.org/ncbigene/6698", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "small proline-rich protein 1A" }, "metanode": "Gene" }, { "id": 33431, "identifier": "GO:0048268", "identifier_type": "str", "name": "clathrin coat assembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048268", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33432, "identifier": "GO:0002159", "identifier_type": "str", "name": "desmosome assembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002159", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33433, "identifier": "9425", "identifier_type": "int", "name": "CDYL", "properties": { "url": "http://identifiers.org/ncbigene/9425", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "chromodomain protein, Y-like" }, "metanode": "Gene" }, { "id": 33434, "identifier": "GO:0042593", "identifier_type": "str", "name": "glucose homeostasis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042593", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33435, "identifier": "GO:0001672", "identifier_type": "str", "name": "regulation of chromatin assembly or disassembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0001672", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33436, "identifier": "C3665818", "identifier_type": "str", "name": "Medication residue present", "properties": { "url": "http://identifiers.org/umls/C3665818", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 33437, "identifier": "3189", "identifier_type": "int", "name": "HNRNPH3", "properties": { "url": "http://identifiers.org/ncbigene/3189", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "heterogeneous nuclear ribonucleoprotein H3 (2H9)" }, "metanode": "Gene" }, { "id": 33438, "identifier": "403253", "identifier_type": "int", "name": "OR4A47", "properties": { "url": "http://identifiers.org/ncbigene/403253", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "olfactory receptor, family 4, subfamily A, member 47" }, "metanode": "Gene" }, { "id": 33439, "identifier": "C0158986", "identifier_type": "str", "name": "Hypoglycaemia neonatal", "properties": { "url": "http://identifiers.org/umls/C0158986", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 33440, "identifier": "GO:0006878", "identifier_type": "str", "name": "cellular copper ion homeostasis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006878", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33441, "identifier": "390792", "identifier_type": "int", "name": "KRT39", "properties": { "url": "http://identifiers.org/ncbigene/390792", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "keratin 39, type I" }, "metanode": "Gene" }, { "id": 33442, "identifier": "C2981158", "identifier_type": "str", "name": "Loss of libido", "properties": { "url": "http://identifiers.org/umls/C2981158", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 33443, "identifier": "57622", "identifier_type": "int", "name": "LRFN1", "properties": { "url": "http://identifiers.org/ncbigene/57622", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "leucine rich repeat and fibronectin type III domain containing 1" }, "metanode": "Gene" } ] }