Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=33525

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33550",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33500",
    "results": [
        {
            "id": 33518,
            "identifier": "114932",
            "identifier_type": "int",
            "name": "MRFAP1L1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/114932",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "Morf4 family associated protein 1-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 33519,
            "identifier": "GO:0002484",
            "identifier_type": "str",
            "name": "antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002484",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33520,
            "identifier": "6523",
            "identifier_type": "int",
            "name": "SLC5A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6523",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "solute carrier family 5 (sodium/glucose cotransporter), member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 33521,
            "identifier": "C0577822",
            "identifier_type": "str",
            "name": "Heart sounds abnormal",
            "properties": {
                "url": "http://identifiers.org/umls/C0577822",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 33522,
            "identifier": "GO:0000961",
            "identifier_type": "str",
            "name": "negative regulation of mitochondrial RNA catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000961",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33523,
            "identifier": "23567",
            "identifier_type": "int",
            "name": "ZNF346",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23567",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "zinc finger protein 346"
            },
            "metanode": "Gene"
        },
        {
            "id": 33524,
            "identifier": "132299",
            "identifier_type": "int",
            "name": "OCIAD2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/132299",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "OCIA domain containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 33776,
            "identifier": "C2173677",
            "identifier_type": "str",
            "name": "Renal cyst",
            "properties": {
                "url": "http://identifiers.org/umls/C2173677",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 33525,
            "identifier": "9734",
            "identifier_type": "int",
            "name": "HDAC9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9734",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "histone deacetylase 9"
            },
            "metanode": "Gene"
        },
        {
            "id": 33526,
            "identifier": "GO:0030295",
            "identifier_type": "str",
            "name": "protein kinase activator activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030295",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 33527,
            "identifier": "340595",
            "identifier_type": "int",
            "name": "ZCCHC16",
            "properties": {
                "url": "http://identifiers.org/ncbigene/340595",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "zinc finger, CCHC domain containing 16"
            },
            "metanode": "Gene"
        },
        {
            "id": 33528,
            "identifier": "3680",
            "identifier_type": "int",
            "name": "ITGA9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3680",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "integrin, alpha 9"
            },
            "metanode": "Gene"
        },
        {
            "id": 33529,
            "identifier": "GO:0014855",
            "identifier_type": "str",
            "name": "striated muscle cell proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0014855",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33530,
            "identifier": "80776",
            "identifier_type": "int",
            "name": "B9D2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80776",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "B9 protein domain 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 33531,
            "identifier": "GO:0005315",
            "identifier_type": "str",
            "name": "inorganic phosphate transmembrane transporter activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005315",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 33532,
            "identifier": "GO:0034272",
            "identifier_type": "str",
            "name": "phosphatidylinositol 3-kinase complex, class III, type II",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034272",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 33533,
            "identifier": "DB08798",
            "identifier_type": "str",
            "name": "Sulfamoxole",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB08798",
                "inchi": "InChI=1S/C11H13N3O3S/c1-7-8(2)17-11(13-7)14-18(15,16)10-5-3-9(12)4-6-10/h3-6H,12H2,1-2H3,(H,13,14)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CYFLXLSBHQBMFT-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 33534,
            "identifier": "GO:0072078",
            "identifier_type": "str",
            "name": "nephron tubule morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072078",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33535,
            "identifier": "222194",
            "identifier_type": "int",
            "name": "RSBN1L",
            "properties": {
                "url": "http://identifiers.org/ncbigene/222194",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "round spermatid basic protein 1-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 33536,
            "identifier": "GO:0014013",
            "identifier_type": "str",
            "name": "regulation of gliogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0014013",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33537,
            "identifier": "C0233472",
            "identifier_type": "str",
            "name": "Affect lability",
            "properties": {
                "url": "http://identifiers.org/umls/C0233472",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 33538,
            "identifier": "63035",
            "identifier_type": "int",
            "name": "BCORL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/63035",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "BCL6 corepressor-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 33539,
            "identifier": "DB06290",
            "identifier_type": "str",
            "name": "SIMEPREVIR",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06290",
                "inchi": "InChI=1/C38H47N5O7S2/c1-21(2)30-20-51-35(40-30)29-18-32(26-13-14-31(49-5)22(3)33(26)39-29)50-24-16-27-28(17-24)36(45)43(4)15-9-7-6-8-10-23-19-38(23,41-34(27)44)37(46)42-52(47,48)25-11-12-25/h8,10,13-14,18,20-21,23-25,27-28H,6-7,9,11-12,15-17,19H2,1-5H3,(H,41,44)(H,42,46)/b10-8-/t23-,24?,27+,28+,38+/s2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JTZZSQYMACOLNN-RCSAWCOCNA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 33540,
            "identifier": "3357",
            "identifier_type": "int",
            "name": "HTR2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3357",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled"
            },
            "metanode": "Gene"
        },
        {
            "id": 33541,
            "identifier": "D012133",
            "identifier_type": "str",
            "name": "Respiratory Paralysis",
            "properties": {
                "url": "http://identifiers.org/mesh/D012133",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        }
    ]
}