Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=33575
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33600", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33550", "results": [ { "id": 33567, "identifier": "79152", "identifier_type": "int", "name": "FA2H", "properties": { "url": "http://identifiers.org/ncbigene/79152", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "fatty acid 2-hydroxylase" }, "metanode": "Gene" }, { "id": 33568, "identifier": "GO:0090162", "identifier_type": "str", "name": "establishment of epithelial cell polarity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0090162", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33569, "identifier": "PC7_3883", "identifier_type": "str", "name": "Fatty acids", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 33570, "identifier": "GO:0009081", "identifier_type": "str", "name": "branched-chain amino acid metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009081", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33571, "identifier": "7411", "identifier_type": "int", "name": "VBP1", "properties": { "url": "http://identifiers.org/ncbigene/7411", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "von Hippel-Lindau binding protein 1" }, "metanode": "Gene" }, { "id": 33572, "identifier": "GO:0052472", "identifier_type": "str", "name": "modulation by host of symbiont transcription", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0052472", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33573, "identifier": "GO:0070233", "identifier_type": "str", "name": "negative regulation of T cell apoptotic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070233", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33574, "identifier": "PC7_1063", "identifier_type": "str", "name": "AKT phosphorylates targets in the cytosol", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 33575, "identifier": "26120", "identifier_type": "int", "name": "DKFZP564C152", "properties": { "url": "http://identifiers.org/ncbigene/26120", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "DKFZP564C152 protein" }, "metanode": "Gene" }, { "id": 33576, "identifier": "55806", "identifier_type": "int", "name": "HR", "properties": { "url": "http://identifiers.org/ncbigene/55806", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "hair growth associated" }, "metanode": "Gene" }, { "id": 33577, "identifier": "102724101", "identifier_type": "int", "name": "LOC102724101", "properties": { "url": "http://identifiers.org/ncbigene/102724101", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "TP53-target gene 3 protein" }, "metanode": "Gene" }, { "id": 33578, "identifier": "N0000191267", "identifier_type": "str", "name": "Cytochrome P450 2D6 Inducers", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000191267", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Mechanism of Action" }, "metanode": "Pharmacologic Class" }, { "id": 33579, "identifier": "105371430", "identifier_type": "int", "name": "LOC105371430", "properties": { "url": "http://identifiers.org/ncbigene/105371430", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "mucin-17-like" }, "metanode": "Gene" }, { "id": 33580, "identifier": "105376851", "identifier_type": "int", "name": "LOC105376851", "properties": { "url": "http://identifiers.org/ncbigene/105376851", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "uncharacterized LOC105376851" }, "metanode": "Gene" }, { "id": 33581, "identifier": "472", "identifier_type": "int", "name": "ATM", "properties": { "url": "http://identifiers.org/ncbigene/472", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "ATM serine/threonine kinase" }, "metanode": "Gene" }, { "id": 33582, "identifier": "C0549386", "identifier_type": "str", "name": "Sensation of warmth", "properties": { "url": "http://identifiers.org/umls/C0549386", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 33583, "identifier": "GO:1903232", "identifier_type": "str", "name": "melanosome assembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903232", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33584, "identifier": "27074", "identifier_type": "int", "name": "LAMP3", "properties": { "url": "http://identifiers.org/ncbigene/27074", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "lysosomal-associated membrane protein 3" }, "metanode": "Gene" }, { "id": 33585, "identifier": "2941", "identifier_type": "int", "name": "GSTA4", "properties": { "url": "http://identifiers.org/ncbigene/2941", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "glutathione S-transferase alpha 4" }, "metanode": "Gene" }, { "id": 33586, "identifier": "223082", "identifier_type": "int", "name": "ZNRF2", "properties": { "url": "http://identifiers.org/ncbigene/223082", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "zinc and ring finger 2, E3 ubiquitin protein ligase" }, "metanode": "Gene" }, { "id": 33587, "identifier": "645840", "identifier_type": "int", "name": "TXNRD3NB", "properties": { "url": "http://identifiers.org/ncbigene/645840", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "thioredoxin reductase 3 neighbor" }, "metanode": "Gene" }, { "id": 33588, "identifier": "GO:2000665", "identifier_type": "str", "name": "regulation of interleukin-13 secretion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000665", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 33589, "identifier": "WP1601_r84700", "identifier_type": "str", "name": "Fluoropyrimidine Activity", "properties": { "url": "http://www.wikipathways.org/instance/WP1601_r84700", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 33590, "identifier": "5266", "identifier_type": "int", "name": "PI3", "properties": { "url": "http://identifiers.org/ncbigene/5266", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "peptidase inhibitor 3, skin-derived" }, "metanode": "Gene" }, { "id": 33591, "identifier": "GO:0051709", "identifier_type": "str", "name": "regulation of killing of cells of other organism", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051709", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }