Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=33600

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33625",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=33575",
    "results": [
        {
            "id": 33592,
            "identifier": "C0152459",
            "identifier_type": "str",
            "name": "Skin striae",
            "properties": {
                "url": "http://identifiers.org/umls/C0152459",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 33593,
            "identifier": "23361",
            "identifier_type": "int",
            "name": "ZNF629",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23361",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "zinc finger protein 629"
            },
            "metanode": "Gene"
        },
        {
            "id": 33594,
            "identifier": "143458",
            "identifier_type": "int",
            "name": "LDLRAD3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/143458",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "low density lipoprotein receptor class A domain containing 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 33595,
            "identifier": "GO:0044030",
            "identifier_type": "str",
            "name": "regulation of DNA methylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044030",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33597,
            "identifier": "56114",
            "identifier_type": "int",
            "name": "PCDHGA1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56114",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "protocadherin gamma subfamily A, 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 33598,
            "identifier": "DB00559",
            "identifier_type": "str",
            "name": "Bosentan",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00559",
                "inchi": "InChI=1S/C27H29N5O6S/c1-27(2,3)18-10-12-19(13-11-18)39(34,35)32-23-22(38-21-9-6-5-8-20(21)36-4)26(37-17-16-33)31-25(30-23)24-28-14-7-15-29-24/h5-15,33H,16-17H2,1-4H3,(H,30,31,32)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GJPICJJJRGTNOD-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 33599,
            "identifier": "C0542007",
            "identifier_type": "str",
            "name": "Cerebral haematoma",
            "properties": {
                "url": "http://identifiers.org/umls/C0542007",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 33600,
            "identifier": "79663",
            "identifier_type": "int",
            "name": "HSPBAP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79663",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "HSPB (heat shock 27kDa) associated protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 33601,
            "identifier": "387733",
            "identifier_type": "int",
            "name": "IFITM5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/387733",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "interferon induced transmembrane protein 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 33602,
            "identifier": "388121",
            "identifier_type": "int",
            "name": "TNFAIP8L3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/388121",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "tumor necrosis factor, alpha-induced protein 8-like 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 33603,
            "identifier": "796",
            "identifier_type": "int",
            "name": "CALCA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/796",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "calcitonin-related polypeptide alpha"
            },
            "metanode": "Gene"
        },
        {
            "id": 33604,
            "identifier": "9559",
            "identifier_type": "int",
            "name": "VPS26A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9559",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "vacuolar protein sorting 26 homolog A (S. pombe)"
            },
            "metanode": "Gene"
        },
        {
            "id": 33605,
            "identifier": "GO:0055002",
            "identifier_type": "str",
            "name": "striated muscle cell development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0055002",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33606,
            "identifier": "GO:0043154",
            "identifier_type": "str",
            "name": "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043154",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33607,
            "identifier": "C0020676",
            "identifier_type": "str",
            "name": "Hypothyroidism",
            "properties": {
                "url": "http://identifiers.org/umls/C0020676",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 33608,
            "identifier": "728841",
            "identifier_type": "int",
            "name": "NBPF8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/728841",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "neuroblastoma breakpoint family, member 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 33609,
            "identifier": "GO:0004611",
            "identifier_type": "str",
            "name": "phosphoenolpyruvate carboxykinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004611",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 33610,
            "identifier": "3249",
            "identifier_type": "int",
            "name": "HPN",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3249",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "hepsin"
            },
            "metanode": "Gene"
        },
        {
            "id": 33611,
            "identifier": "GO:0000278",
            "identifier_type": "str",
            "name": "mitotic cell cycle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000278",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33612,
            "identifier": "PC7_4276",
            "identifier_type": "str",
            "name": "Glycosphingolipid metabolism",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 33613,
            "identifier": "C1095967",
            "identifier_type": "str",
            "name": "Psychiatric evaluation abnormal",
            "properties": {
                "url": "http://identifiers.org/umls/C1095967",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 33614,
            "identifier": "GO:0046390",
            "identifier_type": "str",
            "name": "ribose phosphate biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046390",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 33615,
            "identifier": "PC7_4938",
            "identifier_type": "str",
            "name": "LKB1 signaling events",
            "properties": {
                "source": "PID via Pathway Commons",
                "license": "CC0 1.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 33616,
            "identifier": "29851",
            "identifier_type": "int",
            "name": "ICOS",
            "properties": {
                "url": "http://identifiers.org/ncbigene/29851",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "inducible T-cell co-stimulator"
            },
            "metanode": "Gene"
        },
        {
            "id": 33617,
            "identifier": "10241",
            "identifier_type": "int",
            "name": "CALCOCO2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10241",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "calcium binding and coiled-coil domain 2"
            },
            "metanode": "Gene"
        }
    ]
}