Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=3375
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=3400", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=3350", "results": [ { "id": 3361, "identifier": "421", "identifier_type": "int", "name": "ARVCF", "properties": { "url": "http://identifiers.org/ncbigene/421", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "armadillo repeat gene deleted in velocardiofacial syndrome" }, "metanode": "Gene" }, { "id": 3362, "identifier": "9168", "identifier_type": "int", "name": "TMSB10", "properties": { "url": "http://identifiers.org/ncbigene/9168", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "thymosin beta 10" }, "metanode": "Gene" }, { "id": 3363, "identifier": "GO:0030586", "identifier_type": "str", "name": "[methionine synthase] reductase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030586", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 3364, "identifier": "C0857751", "identifier_type": "str", "name": "Erythema multiforme minor", "properties": { "url": "http://identifiers.org/umls/C0857751", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 3365, "identifier": "27023", "identifier_type": "int", "name": "FOXB1", "properties": { "url": "http://identifiers.org/ncbigene/27023", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "forkhead box B1" }, "metanode": "Gene" }, { "id": 3366, "identifier": "2874", "identifier_type": "int", "name": "GPS2", "properties": { "url": "http://identifiers.org/ncbigene/2874", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "G protein pathway suppressor 2" }, "metanode": "Gene" }, { "id": 3367, "identifier": "57563", "identifier_type": "int", "name": "KLHL8", "properties": { "url": "http://identifiers.org/ncbigene/57563", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "kelch-like family member 8" }, "metanode": "Gene" }, { "id": 3368, "identifier": "83452", "identifier_type": "int", "name": "RAB33B", "properties": { "url": "http://identifiers.org/ncbigene/83452", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "RAB33B, member RAS oncogene family" }, "metanode": "Gene" }, { "id": 3369, "identifier": "GO:0031711", "identifier_type": "str", "name": "bradykinin receptor binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031711", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 3370, "identifier": "N0000011281", "identifier_type": "str", "name": "Penicillins", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000011281", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Chemical/Ingredient" }, "metanode": "Pharmacologic Class" }, { "id": 3371, "identifier": "5471", "identifier_type": "int", "name": "PPAT", "properties": { "url": "http://identifiers.org/ncbigene/5471", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "phosphoribosyl pyrophosphate amidotransferase" }, "metanode": "Gene" }, { "id": 3372, "identifier": "51397", "identifier_type": "int", "name": "COMMD10", "properties": { "url": "http://identifiers.org/ncbigene/51397", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "COMM domain containing 10" }, "metanode": "Gene" }, { "id": 3373, "identifier": "PC7_1517", "identifier_type": "str", "name": "Activated TLR4 signalling", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 3374, "identifier": "GO:0012510", "identifier_type": "str", "name": "trans-Golgi network transport vesicle membrane", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0012510", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 3375, "identifier": "C0151815", "identifier_type": "str", "name": "Mesenteric occlusion", "properties": { "url": "http://identifiers.org/umls/C0151815", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 3376, "identifier": "DB01578", "identifier_type": "str", "name": "Metrizamide", "properties": { "url": "http://www.drugbank.ca/drugs/DB01578", "inchi": "InChI=1S/C18H22I3N3O8/c1-5(26)22-12-9(19)8(10(20)14(11(12)21)24(3)6(2)27)17(30)23-13-16(29)15(28)7(4-25)32-18(13)31/h7,13,15-16,18,25,28-29,31H,4H2,1-3H3,(H,22,26)(H,23,30)/t7-,13-,15-,16-,18?/m1/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=BAQCROVBDNBEEB-UBYUBLNFSA-N" }, "metanode": "Compound" }, { "id": 3377, "identifier": "GO:0071791", "identifier_type": "str", "name": "chemokine (C-C motif) ligand 5 binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071791", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 3378, "identifier": "GO:2001270", "identifier_type": "str", "name": "regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2001270", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 3379, "identifier": "105374013", "identifier_type": "int", "name": "LOC105374013", "properties": { "url": "http://identifiers.org/ncbigene/105374013", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "endogenous retrovirus group K member 5 Gag polyprotein" }, "metanode": "Gene" }, { "id": 3380, "identifier": "55274", "identifier_type": "int", "name": "PHF10", "properties": { "url": "http://identifiers.org/ncbigene/55274", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "PHD finger protein 10" }, "metanode": "Gene" }, { "id": 3381, "identifier": "DB01124", "identifier_type": "str", "name": "Tolbutamide", "properties": { "url": "http://www.drugbank.ca/drugs/DB01124", "inchi": "InChI=1S/C12H18N2O3S/c1-3-4-9-13-12(15)14-18(16,17)11-7-5-10(2)6-8-11/h5-8H,3-4,9H2,1-2H3,(H2,13,14,15)", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=JLRGJRBPOGGCBT-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 3382, "identifier": "C1456822", "identifier_type": "str", "name": "Claudication", "properties": { "url": "http://identifiers.org/umls/C1456822", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 3383, "identifier": "PC7_3283", "identifier_type": "str", "name": "Displacement of DNA glycosylase by APE1", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 3384, "identifier": "GO:1904467", "identifier_type": "str", "name": "regulation of tumor necrosis factor secretion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1904467", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 3385, "identifier": "140564", "identifier_type": "int", "name": "APOBEC3D", "properties": { "url": "http://identifiers.org/ncbigene/140564", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D" }, "metanode": "Gene" } ] }