Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=34250

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=34275",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=34225",
    "results": [
        {
            "id": 34245,
            "identifier": "2128",
            "identifier_type": "int",
            "name": "EVX1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2128",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "even-skipped homeobox 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 34246,
            "identifier": "10635",
            "identifier_type": "int",
            "name": "RAD51AP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10635",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "RAD51 associated protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 34247,
            "identifier": "GO:0006995",
            "identifier_type": "str",
            "name": "cellular response to nitrogen starvation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006995",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34248,
            "identifier": "286223",
            "identifier_type": "int",
            "name": "C9orf47",
            "properties": {
                "url": "http://identifiers.org/ncbigene/286223",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "chromosome 9 open reading frame 47"
            },
            "metanode": "Gene"
        },
        {
            "id": 34249,
            "identifier": "GO:0005007",
            "identifier_type": "str",
            "name": "fibroblast growth factor-activated receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005007",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 34250,
            "identifier": "4597",
            "identifier_type": "int",
            "name": "MVD",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4597",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "mevalonate (diphospho) decarboxylase"
            },
            "metanode": "Gene"
        },
        {
            "id": 34251,
            "identifier": "54619",
            "identifier_type": "int",
            "name": "CCNJ",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54619",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "cyclin J"
            },
            "metanode": "Gene"
        },
        {
            "id": 34252,
            "identifier": "GO:0008544",
            "identifier_type": "str",
            "name": "epidermis development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008544",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34253,
            "identifier": "C0338614",
            "identifier_type": "str",
            "name": "Psychotic episode",
            "properties": {
                "url": "http://identifiers.org/umls/C0338614",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34254,
            "identifier": "84919",
            "identifier_type": "int",
            "name": "PPP1R15B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84919",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "protein phosphatase 1, regulatory subunit 15B"
            },
            "metanode": "Gene"
        },
        {
            "id": 34255,
            "identifier": "C0221047",
            "identifier_type": "str",
            "name": "Bradycardia-tachycardia syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C0221047",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34256,
            "identifier": "PC7_3962",
            "identifier_type": "str",
            "name": "Formation of Senescence-Associated Heterochromatin Foci (SAHF)",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 34257,
            "identifier": "137994",
            "identifier_type": "int",
            "name": "LETM2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/137994",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "leucine zipper-EF-hand containing transmembrane protein 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 34258,
            "identifier": "DB00686",
            "identifier_type": "str",
            "name": "Pentosan Polysulfate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00686",
                "inchi": "InChI=1S/C10H18O21S4/c11-3-1-26-10(8(31-35(22,23)24)5(3)28-32(13,14)15)27-4-2-25-9(12)7(30-34(19,20)21)6(4)29-33(16,17)18/h3-12H,1-2H2,(H,13,14,15)(H,16,17,18)(H,19,20,21)(H,22,23,24)/t3-,4-,5+,6+,7-,8-,9-,10+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=FCCNSUIJIOOXEZ-SJYYZXOBSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 34259,
            "identifier": "UBERON:0002005",
            "identifier_type": "str",
            "name": "enteric nervous system",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0002005",
                "bto_id": "BTO:0002506",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D017615"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 34260,
            "identifier": "25775",
            "identifier_type": "int",
            "name": "C22orf24",
            "properties": {
                "url": "http://identifiers.org/ncbigene/25775",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "chromosome 22 open reading frame 24"
            },
            "metanode": "Gene"
        },
        {
            "id": 34261,
            "identifier": "GO:0004944",
            "identifier_type": "str",
            "name": "C5a anaphylatoxin receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004944",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 34262,
            "identifier": "55317",
            "identifier_type": "int",
            "name": "AP5S1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55317",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "adaptor-related protein complex 5, sigma 1 subunit"
            },
            "metanode": "Gene"
        },
        {
            "id": 34263,
            "identifier": "GO:0070989",
            "identifier_type": "str",
            "name": "oxidative demethylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070989",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34264,
            "identifier": "DB00273",
            "identifier_type": "str",
            "name": "Topiramate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00273",
                "inchi": "InChI=1S/C12H21NO8S/c1-10(2)18-7-5-16-12(6-17-22(13,14)15)9(8(7)19-10)20-11(3,4)21-12/h7-9H,5-6H2,1-4H3,(H2,13,14,15)/t7-,8-,9+,12+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=KJADKKWYZYXHBB-XBWDGYHZSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 34265,
            "identifier": "GO:0071929",
            "identifier_type": "str",
            "name": "alpha-tubulin acetylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071929",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34266,
            "identifier": "GO:0048293",
            "identifier_type": "str",
            "name": "regulation of isotype switching to IgE isotypes",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048293",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34267,
            "identifier": "127",
            "identifier_type": "int",
            "name": "ADH4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/127",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "alcohol dehydrogenase 4 (class II), pi polypeptide"
            },
            "metanode": "Gene"
        },
        {
            "id": 34268,
            "identifier": "8618",
            "identifier_type": "int",
            "name": "CADPS",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8618",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "Ca++-dependent secretion activator"
            },
            "metanode": "Gene"
        },
        {
            "id": 34269,
            "identifier": "C0238198",
            "identifier_type": "str",
            "name": "Gastrointestinal stromal tumour",
            "properties": {
                "url": "http://identifiers.org/umls/C0238198",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}