Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=34400

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=34425",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=34375",
    "results": [
        {
            "id": 34395,
            "identifier": "GO:0033625",
            "identifier_type": "str",
            "name": "positive regulation of integrin activation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0033625",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34396,
            "identifier": "23149",
            "identifier_type": "int",
            "name": "FCHO1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23149",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "FCH domain only 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 34397,
            "identifier": "C0542044",
            "identifier_type": "str",
            "name": "Incoherent",
            "properties": {
                "url": "http://identifiers.org/umls/C0542044",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34398,
            "identifier": "C0041466",
            "identifier_type": "str",
            "name": "Typhoid fever",
            "properties": {
                "url": "http://identifiers.org/umls/C0041466",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34399,
            "identifier": "253980",
            "identifier_type": "int",
            "name": "KCTD13",
            "properties": {
                "url": "http://identifiers.org/ncbigene/253980",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "potassium channel tetramerization domain containing 13"
            },
            "metanode": "Gene"
        },
        {
            "id": 34400,
            "identifier": "26472",
            "identifier_type": "int",
            "name": "PPP1R14B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26472",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "protein phosphatase 1, regulatory (inhibitor) subunit 14B"
            },
            "metanode": "Gene"
        },
        {
            "id": 34401,
            "identifier": "C0021122",
            "identifier_type": "str",
            "name": "Impulse-control disorder",
            "properties": {
                "url": "http://identifiers.org/umls/C0021122",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34402,
            "identifier": "5158",
            "identifier_type": "int",
            "name": "PDE6B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5158",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "phosphodiesterase 6B, cGMP-specific, rod, beta"
            },
            "metanode": "Gene"
        },
        {
            "id": 34403,
            "identifier": "GO:2000243",
            "identifier_type": "str",
            "name": "positive regulation of reproductive process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000243",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34404,
            "identifier": "9331",
            "identifier_type": "int",
            "name": "B4GALT6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9331",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 34405,
            "identifier": "C0021831",
            "identifier_type": "str",
            "name": "Unspecified disorder of intestine",
            "properties": {
                "url": "http://identifiers.org/umls/C0021831",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34406,
            "identifier": "219983",
            "identifier_type": "int",
            "name": "OR4D6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/219983",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 4, subfamily D, member 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 34407,
            "identifier": "GO:0015266",
            "identifier_type": "str",
            "name": "protein channel activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015266",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 34408,
            "identifier": "DB00986",
            "identifier_type": "str",
            "name": "Glycopyrrolate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00986",
                "inchi": "InChI=1S/C19H28NO3/c1-20(2)13-12-17(14-20)23-18(21)19(22,16-10-6-7-11-16)15-8-4-3-5-9-15/h3-5,8-9,16-17,22H,6-7,10-14H2,1-2H3/q+1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ANGKOCUUWGHLCE-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 34409,
            "identifier": "D012148",
            "identifier_type": "str",
            "name": "Restless Legs Syndrome",
            "properties": {
                "url": "http://identifiers.org/mesh/D012148",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 34410,
            "identifier": "C0155145",
            "identifier_type": "str",
            "name": "Chronic conjunctivitis",
            "properties": {
                "url": "http://identifiers.org/umls/C0155145",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34411,
            "identifier": "GO:1902710",
            "identifier_type": "str",
            "name": "GABA receptor complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902710",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 34412,
            "identifier": "GO:0040037",
            "identifier_type": "str",
            "name": "negative regulation of fibroblast growth factor receptor signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0040037",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34413,
            "identifier": "29767",
            "identifier_type": "int",
            "name": "TMOD2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/29767",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "tropomodulin 2 (neuronal)"
            },
            "metanode": "Gene"
        },
        {
            "id": 34414,
            "identifier": "5618",
            "identifier_type": "int",
            "name": "PRLR",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5618",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "prolactin receptor"
            },
            "metanode": "Gene"
        },
        {
            "id": 34415,
            "identifier": "GO:0006427",
            "identifier_type": "str",
            "name": "histidyl-tRNA aminoacylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006427",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34416,
            "identifier": "DB00757",
            "identifier_type": "str",
            "name": "Dolasetron",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00757",
                "inchi": "InChI=1S/C19H20N2O3/c22-18-10-21-12-5-11(18)6-13(21)8-14(7-12)24-19(23)16-9-20-17-4-2-1-3-15(16)17/h1-4,9,11-14,20H,5-8,10H2/t11?,12-,13?,14?/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=UKTAZPQNNNJVKR-DBBXXEFVSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 34417,
            "identifier": "285601",
            "identifier_type": "int",
            "name": "GPR150",
            "properties": {
                "url": "http://identifiers.org/ncbigene/285601",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "G protein-coupled receptor 150"
            },
            "metanode": "Gene"
        },
        {
            "id": 34418,
            "identifier": "C0521508",
            "identifier_type": "str",
            "name": "Injection site bruising",
            "properties": {
                "url": "http://identifiers.org/umls/C0521508",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34419,
            "identifier": "DB00168",
            "identifier_type": "str",
            "name": "Aspartame",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00168",
                "inchi": "InChI=1S/C14H18N2O5/c1-21-14(20)11(7-9-5-3-2-4-6-9)16-13(19)10(15)8-12(17)18/h2-6,10-11H,7-8,15H2,1H3,(H,16,19)(H,17,18)/t10-,11-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=IAOZJIPTCAWIRG-QWRGUYRKSA-N"
            },
            "metanode": "Compound"
        }
    ]
}