Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=34675

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=34700",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=34650",
    "results": [
        {
            "id": 34671,
            "identifier": "DB04967",
            "identifier_type": "str",
            "name": "Lucanthone",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB04967",
                "inchi": "InChI=1S/C20H24N2OS/c1-4-22(5-2)13-12-21-16-11-10-14(3)20-18(16)19(23)15-8-6-7-9-17(15)24-20/h6-11,21H,4-5,12-13H2,1-3H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=FBQPGGIHOFZRGH-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 34672,
            "identifier": "DB00970",
            "identifier_type": "str",
            "name": "Dactinomycin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00970",
                "inchi": "InChI=1S/C62H86N12O16/c1-27(2)42-59(84)73-23-17-19-36(73)57(82)69(13)25-38(75)71(15)48(29(5)6)61(86)88-33(11)44(55(80)65-42)67-53(78)35-22-21-31(9)51-46(35)64-47-40(41(63)50(77)32(10)52(47)90-51)54(79)68-45-34(12)89-62(87)49(30(7)8)72(16)39(76)26-70(14)58(83)37-20-18-24-74(37)60(85)43(28(3)4)66-56(45)81/h21-22,27-30,33-34,36-37,42-45,48-49H,17-20,23-26,63H2,1-16H3,(H,65,80)(H,66,81)(H,67,78)(H,68,79)/t33-,34-,36+,37+,42-,43-,44+,45+,48+,49+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=RJURFGZVJUQBHK-IIXSONLDSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 34673,
            "identifier": "29761",
            "identifier_type": "int",
            "name": "USP25",
            "properties": {
                "url": "http://identifiers.org/ncbigene/29761",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "ubiquitin specific peptidase 25"
            },
            "metanode": "Gene"
        },
        {
            "id": 34674,
            "identifier": "79090",
            "identifier_type": "int",
            "name": "TRAPPC6A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79090",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "trafficking protein particle complex 6A"
            },
            "metanode": "Gene"
        },
        {
            "id": 34675,
            "identifier": "GO:0001913",
            "identifier_type": "str",
            "name": "T cell mediated cytotoxicity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001913",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34676,
            "identifier": "239",
            "identifier_type": "int",
            "name": "ALOX12",
            "properties": {
                "url": "http://identifiers.org/ncbigene/239",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "arachidonate 12-lipoxygenase"
            },
            "metanode": "Gene"
        },
        {
            "id": 34677,
            "identifier": "GO:0030123",
            "identifier_type": "str",
            "name": "AP-3 adaptor complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030123",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 34678,
            "identifier": "GO:0070570",
            "identifier_type": "str",
            "name": "regulation of neuron projection regeneration",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070570",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34679,
            "identifier": "PC7_2629",
            "identifier_type": "str",
            "name": "Classical antibody-mediated complement activation",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 34680,
            "identifier": "GO:1990812",
            "identifier_type": "str",
            "name": "growth cone filopodium",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1990812",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 34681,
            "identifier": "2564",
            "identifier_type": "int",
            "name": "GABRE",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2564",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "gamma-aminobutyric acid (GABA) A receptor, epsilon"
            },
            "metanode": "Gene"
        },
        {
            "id": 34682,
            "identifier": "11199",
            "identifier_type": "int",
            "name": "ANXA10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11199",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "annexin A10"
            },
            "metanode": "Gene"
        },
        {
            "id": 34683,
            "identifier": "C0162565",
            "identifier_type": "str",
            "name": "Porphyria acute",
            "properties": {
                "url": "http://identifiers.org/umls/C0162565",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34684,
            "identifier": "C0858867",
            "identifier_type": "str",
            "name": "Reticulocytopenia",
            "properties": {
                "url": "http://identifiers.org/umls/C0858867",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 34685,
            "identifier": "5017",
            "identifier_type": "int",
            "name": "OVOL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5017",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "ovo-like zinc finger 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 34686,
            "identifier": "GO:0022401",
            "identifier_type": "str",
            "name": "negative adaptation of signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0022401",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34687,
            "identifier": "55055",
            "identifier_type": "int",
            "name": "ZWILCH",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55055",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "zwilch kinetochore protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 34688,
            "identifier": "GO:0006678",
            "identifier_type": "str",
            "name": "glucosylceramide metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006678",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34689,
            "identifier": "GO:0014738",
            "identifier_type": "str",
            "name": "regulation of muscle hyperplasia",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0014738",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34690,
            "identifier": "65985",
            "identifier_type": "int",
            "name": "AACS",
            "properties": {
                "url": "http://identifiers.org/ncbigene/65985",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "acetoacetyl-CoA synthetase"
            },
            "metanode": "Gene"
        },
        {
            "id": 34691,
            "identifier": "23112",
            "identifier_type": "int",
            "name": "TNRC6B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23112",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "trinucleotide repeat containing 6B"
            },
            "metanode": "Gene"
        },
        {
            "id": 34692,
            "identifier": "7486",
            "identifier_type": "int",
            "name": "WRN",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7486",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "Werner syndrome, RecQ helicase-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 34693,
            "identifier": "GO:0032040",
            "identifier_type": "str",
            "name": "small-subunit processome",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032040",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 34694,
            "identifier": "92856",
            "identifier_type": "int",
            "name": "IMP4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/92856",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "IMP4, U3 small nucleolar ribonucleoprotein"
            },
            "metanode": "Gene"
        },
        {
            "id": 34695,
            "identifier": "GO:0007405",
            "identifier_type": "str",
            "name": "neuroblast proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007405",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}