Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=35000

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=35025",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=34975",
    "results": [
        {
            "id": 34996,
            "identifier": "2671",
            "identifier_type": "int",
            "name": "GFER",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2671",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "growth factor, augmenter of liver regeneration"
            },
            "metanode": "Gene"
        },
        {
            "id": 34997,
            "identifier": "11162",
            "identifier_type": "int",
            "name": "NUDT6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11162",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "nudix (nucleoside diphosphate linked moiety X)-type motif 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 34998,
            "identifier": "GO:0030242",
            "identifier_type": "str",
            "name": "pexophagy",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030242",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 34999,
            "identifier": "GO:0098815",
            "identifier_type": "str",
            "name": "modulation of excitatory postsynaptic potential",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0098815",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35000,
            "identifier": "GO:0086011",
            "identifier_type": "str",
            "name": "membrane repolarization during action potential",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0086011",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35001,
            "identifier": "GO:0045626",
            "identifier_type": "str",
            "name": "negative regulation of T-helper 1 cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045626",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35002,
            "identifier": "55146",
            "identifier_type": "int",
            "name": "ZDHHC4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55146",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "zinc finger, DHHC-type containing 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 35003,
            "identifier": "DB00889",
            "identifier_type": "str",
            "name": "Granisetron",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00889",
                "inchi": "InChI=1S/C18H24N4O/c1-21-13-6-5-7-14(21)11-12(10-13)19-18(23)17-15-8-3-4-9-16(15)22(2)20-17/h3-4,8-9,12-14H,5-7,10-11H2,1-2H3,(H,19,23)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=MFWNKCLOYSRHCJ-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 35004,
            "identifier": "GO:0030250",
            "identifier_type": "str",
            "name": "guanylate cyclase activator activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030250",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 35005,
            "identifier": "PC7_5529",
            "identifier_type": "str",
            "name": "Mitotic G2-G2/M phases",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 35006,
            "identifier": "GO:0001961",
            "identifier_type": "str",
            "name": "positive regulation of cytokine-mediated signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001961",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35007,
            "identifier": "GO:0010586",
            "identifier_type": "str",
            "name": "miRNA metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010586",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35008,
            "identifier": "GO:0030252",
            "identifier_type": "str",
            "name": "growth hormone secretion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030252",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35009,
            "identifier": "254050",
            "identifier_type": "int",
            "name": "LRRC43",
            "properties": {
                "url": "http://identifiers.org/ncbigene/254050",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "leucine rich repeat containing 43"
            },
            "metanode": "Gene"
        },
        {
            "id": 35010,
            "identifier": "C0236023",
            "identifier_type": "str",
            "name": "Periodontal destruction",
            "properties": {
                "url": "http://identifiers.org/umls/C0236023",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 35011,
            "identifier": "55844",
            "identifier_type": "int",
            "name": "PPP2R2D",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55844",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "protein phosphatase 2, regulatory subunit B, delta"
            },
            "metanode": "Gene"
        },
        {
            "id": 35012,
            "identifier": "PC7_6654",
            "identifier_type": "str",
            "name": "Purine salvage",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 35013,
            "identifier": "PC7_7758",
            "identifier_type": "str",
            "name": "Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 35014,
            "identifier": "C1142034",
            "identifier_type": "str",
            "name": "Tandem gait test abnormal",
            "properties": {
                "url": "http://identifiers.org/umls/C1142034",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 35015,
            "identifier": "GO:0005221",
            "identifier_type": "str",
            "name": "intracellular cyclic nucleotide activated cation channel activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005221",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 35016,
            "identifier": "526",
            "identifier_type": "int",
            "name": "ATP6V1B2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/526",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2"
            },
            "metanode": "Gene"
        },
        {
            "id": 35017,
            "identifier": "9145",
            "identifier_type": "int",
            "name": "SYNGR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9145",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "synaptogyrin 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 35018,
            "identifier": "GO:0090092",
            "identifier_type": "str",
            "name": "regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090092",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35019,
            "identifier": "C0920070",
            "identifier_type": "str",
            "name": "Cervical smear test positive",
            "properties": {
                "url": "http://identifiers.org/umls/C0920070",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 35020,
            "identifier": "81846",
            "identifier_type": "int",
            "name": "SBF2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81846",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "SET binding factor 2"
            },
            "metanode": "Gene"
        }
    ]
}