Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=35075

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=35100",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=35050",
    "results": [
        {
            "id": 35071,
            "identifier": "GO:0015645",
            "identifier_type": "str",
            "name": "fatty acid ligase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015645",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 35072,
            "identifier": "102725155",
            "identifier_type": "int",
            "name": "LOC102725155",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102725155",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "uncharacterized LOC102725155"
            },
            "metanode": "Gene"
        },
        {
            "id": 35073,
            "identifier": "257407",
            "identifier_type": "int",
            "name": "C2orf72",
            "properties": {
                "url": "http://identifiers.org/ncbigene/257407",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "chromosome 2 open reading frame 72"
            },
            "metanode": "Gene"
        },
        {
            "id": 35074,
            "identifier": "1414",
            "identifier_type": "int",
            "name": "CRYBB1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1414",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "crystallin, beta B1"
            },
            "metanode": "Gene"
        },
        {
            "id": 35075,
            "identifier": "GO:2000051",
            "identifier_type": "str",
            "name": "negative regulation of non-canonical Wnt signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000051",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35076,
            "identifier": "4684",
            "identifier_type": "int",
            "name": "NCAM1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4684",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "neural cell adhesion molecule 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 35077,
            "identifier": "6742",
            "identifier_type": "int",
            "name": "SSBP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6742",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "single-stranded DNA binding protein 1, mitochondrial"
            },
            "metanode": "Gene"
        },
        {
            "id": 35078,
            "identifier": "8534",
            "identifier_type": "int",
            "name": "CHST1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8534",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "carbohydrate (keratan sulfate Gal-6) sulfotransferase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 35079,
            "identifier": "GO:1904396",
            "identifier_type": "str",
            "name": "regulation of neuromuscular junction development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904396",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35080,
            "identifier": "DB01100",
            "identifier_type": "str",
            "name": "Pimozide",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01100",
                "inchi": "InChI=1S/C28H29F2N3O/c29-22-11-7-20(8-12-22)25(21-9-13-23(30)14-10-21)4-3-17-32-18-15-24(16-19-32)33-27-6-2-1-5-26(27)31-28(33)34/h1-2,5-14,24-25H,3-4,15-19H2,(H,31,34)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=YVUQSNJEYSNKRX-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 35081,
            "identifier": "389161",
            "identifier_type": "int",
            "name": "ANKUB1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/389161",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "ankyrin repeat and ubiquitin domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 35082,
            "identifier": "284106",
            "identifier_type": "int",
            "name": "CISD3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284106",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "CDGSH iron sulfur domain 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 35083,
            "identifier": "2224",
            "identifier_type": "int",
            "name": "FDPS",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2224",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "farnesyl diphosphate synthase"
            },
            "metanode": "Gene"
        },
        {
            "id": 35084,
            "identifier": "10987",
            "identifier_type": "int",
            "name": "COPS5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10987",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "COP9 signalosome subunit 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 35085,
            "identifier": "GO:1900222",
            "identifier_type": "str",
            "name": "negative regulation of beta-amyloid clearance",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1900222",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35086,
            "identifier": "GO:2000707",
            "identifier_type": "str",
            "name": "positive regulation of dense core granule biogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000707",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35087,
            "identifier": "C0014860",
            "identifier_type": "str",
            "name": "Oesophageal perforation",
            "properties": {
                "url": "http://identifiers.org/umls/C0014860",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 35088,
            "identifier": "GO:0008641",
            "identifier_type": "str",
            "name": "small protein activating enzyme activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008641",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 35089,
            "identifier": "GO:0070647",
            "identifier_type": "str",
            "name": "protein modification by small protein conjugation or removal",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070647",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35090,
            "identifier": "4821",
            "identifier_type": "int",
            "name": "NKX2-2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4821",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "NK2 homeobox 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 35091,
            "identifier": "DB00278",
            "identifier_type": "str",
            "name": "Argatroban",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00278",
                "inchi": "InChI=1S/C23H36N6O5S/c1-14-8-10-29(18(12-14)22(31)32)21(30)17(6-4-9-26-23(24)25)28-35(33,34)19-7-3-5-16-11-15(2)13-27-20(16)19/h3,5,7,14-15,17-18,27-28H,4,6,8-13H2,1-2H3,(H,31,32)(H4,24,25,26)/t14-,15-,17+,18-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=KXNPVXPOPUZYGB-XYVMCAHJSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 35092,
            "identifier": "GO:0004468",
            "identifier_type": "str",
            "name": "lysine N-acetyltransferase activity, acting on acetyl phosphate as donor",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004468",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 35093,
            "identifier": "GO:0052656",
            "identifier_type": "str",
            "name": "L-isoleucine transaminase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052656",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 35094,
            "identifier": "GO:0009249",
            "identifier_type": "str",
            "name": "protein lipoylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009249",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 35095,
            "identifier": "PC7_3680",
            "identifier_type": "str",
            "name": "EphrinA-EPHA pathway",
            "properties": {
                "source": "PID via Pathway Commons",
                "license": "CC0 1.0"
            },
            "metanode": "Pathway"
        }
    ]
}