Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=35350
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=35375", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=35325", "results": [ { "id": 35346, "identifier": "N0000006801", "identifier_type": "str", "name": "Bile Acids and Salts", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000006801", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Chemical/Ingredient" }, "metanode": "Pharmacologic Class" }, { "id": 35347, "identifier": "GO:0072304", "identifier_type": "str", "name": "regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0072304", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 35348, "identifier": "PC7_8703", "identifier_type": "str", "name": "Vasopressin-like receptors", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 35349, "identifier": "389895", "identifier_type": "int", "name": "LOC389895", "properties": { "url": "http://identifiers.org/ncbigene/389895", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "chromosome 16 open reading frame 72-like" }, "metanode": "Gene" }, { "id": 35350, "identifier": "2958", "identifier_type": "int", "name": "GTF2A2", "properties": { "url": "http://identifiers.org/ncbigene/2958", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "general transcription factor IIA, 2, 12kDa" }, "metanode": "Gene" }, { "id": 35351, "identifier": "57519", "identifier_type": "int", "name": "STARD9", "properties": { "url": "http://identifiers.org/ncbigene/57519", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "StAR-related lipid transfer (START) domain containing 9" }, "metanode": "Gene" }, { "id": 35352, "identifier": "GO:0031860", "identifier_type": "str", "name": "telomeric 3' overhang formation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031860", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 35353, "identifier": "GO:0032616", "identifier_type": "str", "name": "interleukin-13 production", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032616", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 35354, "identifier": "GO:0016442", "identifier_type": "str", "name": "RISC complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016442", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 35355, "identifier": "C0043094", "identifier_type": "str", "name": "Weight increased", "properties": { "url": "http://identifiers.org/umls/C0043094", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 35356, "identifier": "GO:0043206", "identifier_type": "str", "name": "extracellular fibril organization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043206", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 35357, "identifier": "5411", "identifier_type": "int", "name": "PNN", "properties": { "url": "http://identifiers.org/ncbigene/5411", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "pinin, desmosome associated protein" }, "metanode": "Gene" }, { "id": 35358, "identifier": "GO:0051568", "identifier_type": "str", "name": "histone H3-K4 methylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051568", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 35359, "identifier": "51337", "identifier_type": "int", "name": "THEM6", "properties": { "url": "http://identifiers.org/ncbigene/51337", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "thioesterase superfamily member 6" }, "metanode": "Gene" }, { "id": 35360, "identifier": "C0021167", "identifier_type": "str", "name": "Incontinence", "properties": { "url": "http://identifiers.org/umls/C0021167", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 35361, "identifier": "23506", "identifier_type": "int", "name": "GLTSCR1L", "properties": { "url": "http://identifiers.org/ncbigene/23506", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "GLTSCR1-like" }, "metanode": "Gene" }, { "id": 35362, "identifier": "GO:0047617", "identifier_type": "str", "name": "acyl-CoA hydrolase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0047617", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 35363, "identifier": "PC7_5444", "identifier_type": "str", "name": "MicroRNA (miRNA) biogenesis", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 35364, "identifier": "GO:0097038", "identifier_type": "str", "name": "perinuclear endoplasmic reticulum", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0097038", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 35365, "identifier": "DB06704", "identifier_type": "str", "name": "Iobenguane", "properties": { "url": "http://www.drugbank.ca/drugs/DB06704", "inchi": "InChI=1S/C8H10IN3/c9-7-3-1-2-6(4-7)5-12-8(10)11/h1-4H,5H2,(H4,10,11,12)", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=PDWUPXJEEYOOTR-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 35366, "identifier": "79792", "identifier_type": "int", "name": "GSDMD", "properties": { "url": "http://identifiers.org/ncbigene/79792", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "gasdermin D" }, "metanode": "Gene" }, { "id": 35367, "identifier": "23658", "identifier_type": "int", "name": "LSM5", "properties": { "url": "http://identifiers.org/ncbigene/23658", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 35368, "identifier": "GO:0035811", "identifier_type": "str", "name": "negative regulation of urine volume", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035811", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 35369, "identifier": "941", "identifier_type": "int", "name": "CD80", "properties": { "url": "http://identifiers.org/ncbigene/941", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "CD80 molecule" }, "metanode": "Gene" }, { "id": 35370, "identifier": "9688", "identifier_type": "int", "name": "NUP93", "properties": { "url": "http://identifiers.org/ncbigene/9688", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "nucleoporin 93kDa" }, "metanode": "Gene" } ] }