Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=36375

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=36400",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=36350",
    "results": [
        {
            "id": 36371,
            "identifier": "DB01247",
            "identifier_type": "str",
            "name": "Isocarboxazid",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01247",
                "inchi": "InChI=1S/C12H13N3O2/c1-9-7-11(15-17-9)12(16)14-13-8-10-5-3-2-4-6-10/h2-7,13H,8H2,1H3,(H,14,16)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=XKFPYPQQHFEXRZ-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 36372,
            "identifier": "57876",
            "identifier_type": "int",
            "name": "MUC3B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57876",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "mucin 3B, cell surface associated"
            },
            "metanode": "Gene"
        },
        {
            "id": 36373,
            "identifier": "DB00486",
            "identifier_type": "str",
            "name": "Nabilone",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00486",
                "inchi": "InChI=1S/C24H36O3/c1-6-7-8-9-12-23(2,3)16-13-20(26)22-18-15-17(25)10-11-19(18)24(4,5)27-21(22)14-16/h13-14,18-19,26H,6-12,15H2,1-5H3/t18-,19-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GECBBEABIDMGGL-RTBURBONSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 36374,
            "identifier": "GO:0048732",
            "identifier_type": "str",
            "name": "gland development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048732",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36375,
            "identifier": "UBERON:0001529",
            "identifier_type": "str",
            "name": "brachiocephalic artery",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0001529",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D016122"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 36376,
            "identifier": "5768",
            "identifier_type": "int",
            "name": "QSOX1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5768",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "quiescin Q6 sulfhydryl oxidase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 36377,
            "identifier": "10435",
            "identifier_type": "int",
            "name": "CDC42EP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10435",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "CDC42 effector protein (Rho GTPase binding) 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 36378,
            "identifier": "C1142166",
            "identifier_type": "str",
            "name": "Brugada syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C1142166",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 36379,
            "identifier": "4141",
            "identifier_type": "int",
            "name": "MARS",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4141",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "methionyl-tRNA synthetase"
            },
            "metanode": "Gene"
        },
        {
            "id": 36380,
            "identifier": "C0162834",
            "identifier_type": "str",
            "name": "Skin hyperpigmentation",
            "properties": {
                "url": "http://identifiers.org/umls/C0162834",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 36381,
            "identifier": "GO:0030997",
            "identifier_type": "str",
            "name": "regulation of centriole-centriole cohesion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030997",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36382,
            "identifier": "93210",
            "identifier_type": "int",
            "name": "PGAP3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/93210",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "post-GPI attachment to proteins 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 36383,
            "identifier": "GO:0004707",
            "identifier_type": "str",
            "name": "MAP kinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004707",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 36384,
            "identifier": "145773",
            "identifier_type": "int",
            "name": "FAM81A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/145773",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "family with sequence similarity 81, member A"
            },
            "metanode": "Gene"
        },
        {
            "id": 36385,
            "identifier": "GO:0044390",
            "identifier_type": "str",
            "name": "ubiquitin-like protein conjugating enzyme binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044390",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 36386,
            "identifier": "6722",
            "identifier_type": "int",
            "name": "SRF",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6722",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "serum response factor (c-fos serum response element-binding transcription factor)"
            },
            "metanode": "Gene"
        },
        {
            "id": 36387,
            "identifier": "146429",
            "identifier_type": "int",
            "name": "SLC22A31",
            "properties": {
                "url": "http://identifiers.org/ncbigene/146429",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "solute carrier family 22, member 31"
            },
            "metanode": "Gene"
        },
        {
            "id": 36388,
            "identifier": "56616",
            "identifier_type": "int",
            "name": "DIABLO",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56616",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "diablo, IAP-binding mitochondrial protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 36389,
            "identifier": "GO:0040020",
            "identifier_type": "str",
            "name": "regulation of meiotic nuclear division",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0040020",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36390,
            "identifier": "117584",
            "identifier_type": "int",
            "name": "RFFL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/117584",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "ring finger and FYVE-like domain containing E3 ubiquitin protein ligase"
            },
            "metanode": "Gene"
        },
        {
            "id": 36391,
            "identifier": "105376907",
            "identifier_type": "int",
            "name": "LOC105376907",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105376907",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "uncharacterized LOC105376907"
            },
            "metanode": "Gene"
        },
        {
            "id": 36392,
            "identifier": "1298",
            "identifier_type": "int",
            "name": "COL9A2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1298",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "collagen, type IX, alpha 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 36393,
            "identifier": "10061",
            "identifier_type": "int",
            "name": "ABCF2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10061",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "ATP-binding cassette, sub-family F (GCN20), member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 36394,
            "identifier": "GO:2001256",
            "identifier_type": "str",
            "name": "regulation of store-operated calcium entry",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2001256",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36395,
            "identifier": "284370",
            "identifier_type": "int",
            "name": "ZNF615",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284370",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 615"
            },
            "metanode": "Gene"
        }
    ]
}