Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=36425

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=36450",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=36400",
    "results": [
        {
            "id": 36421,
            "identifier": "GO:0048200",
            "identifier_type": "str",
            "name": "Golgi transport vesicle coating",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048200",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36422,
            "identifier": "8742",
            "identifier_type": "int",
            "name": "TNFSF12",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8742",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "tumor necrosis factor (ligand) superfamily, member 12"
            },
            "metanode": "Gene"
        },
        {
            "id": 36423,
            "identifier": "C0155713",
            "identifier_type": "str",
            "name": "Papillary muscle rupture",
            "properties": {
                "url": "http://identifiers.org/umls/C0155713",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 36424,
            "identifier": "C2267227",
            "identifier_type": "str",
            "name": "Bulimia nervosa",
            "properties": {
                "url": "http://identifiers.org/umls/C2267227",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 36425,
            "identifier": "GO:0048641",
            "identifier_type": "str",
            "name": "regulation of skeletal muscle tissue development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048641",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36426,
            "identifier": "C0020305",
            "identifier_type": "str",
            "name": "Hydrops foetalis",
            "properties": {
                "url": "http://identifiers.org/umls/C0020305",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 36427,
            "identifier": "GO:0014704",
            "identifier_type": "str",
            "name": "intercalated disc",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0014704",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 36428,
            "identifier": "2560",
            "identifier_type": "int",
            "name": "GABRB1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2560",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "gamma-aminobutyric acid (GABA) A receptor, beta 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 36429,
            "identifier": "GO:0044268",
            "identifier_type": "str",
            "name": "multicellular organismal protein metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044268",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36430,
            "identifier": "PC7_2610",
            "identifier_type": "str",
            "name": "Citric acid cycle (TCA cycle)",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 36431,
            "identifier": "C0409974",
            "identifier_type": "str",
            "name": "Lupus erythematosus",
            "properties": {
                "url": "http://identifiers.org/umls/C0409974",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 36432,
            "identifier": "5029",
            "identifier_type": "int",
            "name": "P2RY2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5029",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "purinergic receptor P2Y, G-protein coupled, 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 36433,
            "identifier": "55051",
            "identifier_type": "int",
            "name": "NRDE2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55051",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "NRDE-2, necessary for RNA interference, domain containing"
            },
            "metanode": "Gene"
        },
        {
            "id": 36434,
            "identifier": "65997",
            "identifier_type": "int",
            "name": "RASL11B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/65997",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "RAS-like, family 11, member B"
            },
            "metanode": "Gene"
        },
        {
            "id": 36435,
            "identifier": "GO:0005662",
            "identifier_type": "str",
            "name": "DNA replication factor A complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005662",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 36436,
            "identifier": "WP136_r80005",
            "identifier_type": "str",
            "name": "Phase I biotransformations, non P450",
            "properties": {
                "url": "http://www.wikipathways.org/instance/WP136_r80005",
                "source": "WikiPathways",
                "license": "CC BY 3.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 36437,
            "identifier": "285268",
            "identifier_type": "int",
            "name": "ZNF621",
            "properties": {
                "url": "http://identifiers.org/ncbigene/285268",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "zinc finger protein 621"
            },
            "metanode": "Gene"
        },
        {
            "id": 36438,
            "identifier": "C0857035",
            "identifier_type": "str",
            "name": "Acute anaphylaxis",
            "properties": {
                "url": "http://identifiers.org/umls/C0857035",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 36439,
            "identifier": "7482",
            "identifier_type": "int",
            "name": "WNT2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7482",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "wingless-type MMTV integration site family, member 2B"
            },
            "metanode": "Gene"
        },
        {
            "id": 36440,
            "identifier": "GO:0042775",
            "identifier_type": "str",
            "name": "mitochondrial ATP synthesis coupled electron transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042775",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36441,
            "identifier": "GO:0060112",
            "identifier_type": "str",
            "name": "generation of ovulation cycle rhythm",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060112",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36475,
            "identifier": "93035",
            "identifier_type": "int",
            "name": "PKHD1L1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/93035",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 36442,
            "identifier": "DB01590",
            "identifier_type": "str",
            "name": "Everolimus",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01590",
                "inchi": "InChI=1S/C53H83NO14/c1-32-16-12-11-13-17-33(2)44(63-8)30-40-21-19-38(7)53(62,68-40)50(59)51(60)54-23-15-14-18-41(54)52(61)67-45(35(4)28-39-20-22-43(66-25-24-55)46(29-39)64-9)31-42(56)34(3)27-37(6)48(58)49(65-10)47(57)36(5)26-32/h11-13,16-17,27,32,34-36,38-41,43-46,48-49,55,58,62H,14-15,18-26,28-31H2,1-10H3/b13-11+,16-12+,33-17+,37-27+/t32-,34+,35-,36-,38-,39-,40+,41+,43+,44-,45?,46+,48+,49-,53-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=HKVAMNSJSFKALM-CYUZEOOHSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 36443,
            "identifier": "GO:0005747",
            "identifier_type": "str",
            "name": "mitochondrial respiratory chain complex I",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005747",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 36444,
            "identifier": "UBERON:0000996",
            "identifier_type": "str",
            "name": "vagina",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0000996",
                "bto_id": "BTO:0000243",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D014621"
            },
            "metanode": "Anatomy"
        }
    ]
}