Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=36450

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=36475",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=36425",
    "results": [
        {
            "id": 36445,
            "identifier": "GO:0072329",
            "identifier_type": "str",
            "name": "monocarboxylic acid catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072329",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36446,
            "identifier": "56005",
            "identifier_type": "int",
            "name": "MYDGF",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56005",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "myeloid-derived growth factor"
            },
            "metanode": "Gene"
        },
        {
            "id": 36447,
            "identifier": "102724428",
            "identifier_type": "int",
            "name": "LOC102724428",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724428",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "serine/threonine-protein kinase SIK1"
            },
            "metanode": "Gene"
        },
        {
            "id": 36448,
            "identifier": "GO:0043653",
            "identifier_type": "str",
            "name": "mitochondrial fragmentation involved in apoptotic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043653",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36449,
            "identifier": "125336",
            "identifier_type": "int",
            "name": "LOXHD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/125336",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "lipoxygenase homology domains 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 36450,
            "identifier": "9306",
            "identifier_type": "int",
            "name": "SOCS6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9306",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "suppressor of cytokine signaling 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 36451,
            "identifier": "8880",
            "identifier_type": "int",
            "name": "FUBP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8880",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "far upstream element (FUSE) binding protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 36452,
            "identifier": "440699",
            "identifier_type": "int",
            "name": "LRRC52",
            "properties": {
                "url": "http://identifiers.org/ncbigene/440699",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "leucine rich repeat containing 52"
            },
            "metanode": "Gene"
        },
        {
            "id": 36453,
            "identifier": "N0000190109",
            "identifier_type": "str",
            "name": "Organic Anion Transporting Polypeptide 2B1 Inhibitors",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000190109",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Mechanism of Action"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 36454,
            "identifier": "GO:0030620",
            "identifier_type": "str",
            "name": "U2 snRNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030620",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 36455,
            "identifier": "GO:0045257",
            "identifier_type": "str",
            "name": "succinate dehydrogenase complex (ubiquinone)",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045257",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 36456,
            "identifier": "124454",
            "identifier_type": "int",
            "name": "EARS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/124454",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "glutamyl-tRNA synthetase 2, mitochondrial"
            },
            "metanode": "Gene"
        },
        {
            "id": 36457,
            "identifier": "3140",
            "identifier_type": "int",
            "name": "MR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3140",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "major histocompatibility complex, class I-related"
            },
            "metanode": "Gene"
        },
        {
            "id": 36458,
            "identifier": "GO:0033692",
            "identifier_type": "str",
            "name": "cellular polysaccharide biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0033692",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36459,
            "identifier": "57701",
            "identifier_type": "int",
            "name": "NCKAP5L",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57701",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "NCK-associated protein 5-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 36460,
            "identifier": "C0152006",
            "identifier_type": "str",
            "name": "Vitreous opacities",
            "properties": {
                "url": "http://identifiers.org/umls/C0152006",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 36461,
            "identifier": "DB00501",
            "identifier_type": "str",
            "name": "Cimetidine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00501",
                "inchi": "InChI=1S/C10H16N6S/c1-8-9(16-7-15-8)5-17-4-3-13-10(12-2)14-6-11/h7H,3-5H2,1-2H3,(H,15,16)(H2,12,13,14)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=AQIXAKUUQRKLND-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 36462,
            "identifier": "GO:0060800",
            "identifier_type": "str",
            "name": "regulation of cell differentiation involved in embryonic placenta development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060800",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36463,
            "identifier": "GO:1900625",
            "identifier_type": "str",
            "name": "positive regulation of monocyte aggregation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1900625",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36464,
            "identifier": "GO:0006977",
            "identifier_type": "str",
            "name": "DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006977",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 36465,
            "identifier": "5593",
            "identifier_type": "int",
            "name": "PRKG2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5593",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "protein kinase, cGMP-dependent, type II"
            },
            "metanode": "Gene"
        },
        {
            "id": 36466,
            "identifier": "51535",
            "identifier_type": "int",
            "name": "PPHLN1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51535",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "periphilin 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 36467,
            "identifier": "7538",
            "identifier_type": "int",
            "name": "ZFP36",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7538",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "ZFP36 ring finger protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 36468,
            "identifier": "PC7_8332",
            "identifier_type": "str",
            "name": "Translation initiation complex formation",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 36469,
            "identifier": "GO:0036438",
            "identifier_type": "str",
            "name": "maintenance of lens transparency",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0036438",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}